RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NDUFS4O43181 175 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 RDH16O75452 317 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 SORBS2O94875 1100 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 B3GALT4O96024 378 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 CELA2AP08217 269 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 SLC35G6P0C7Q6 338 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 GNLYP22749 145 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 HNF4AP41235 474 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 GDF5P43026 501 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 RAB10P61026 200 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 RELAQ04206 551 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 Q0VFX4 171 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 FAM53BQ14153 422 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 INPP5JQ15735 1006 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 PPP1R3AQ16821 1122 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 PLEKHN1Q494U1 663 aaPredicted RBP12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 ARHGEF39Q8N4T4 335 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 SLC44A1Q8WWI5 657 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 NEIL2Q969S2 332 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 PNPLA2Q96AD5 504 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 THAP11Q96EK4 314 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 LHPPQ9H008 270 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 C14orf105Q9NVL8 296 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 OARD1Q9Y530 152 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 CSAG2Q9Y5P2 127 aa12.91□□□□□ -0.34
VPS9D1-204ENST00000565023 KCNE1BA0A087WTH5 132 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 IGHV3-20A0A0C4DH32 117 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 RIPK2O43353 540 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 KLHL41O60662 606 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 IPO13O94829 963 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 KLHL18O94889 574 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 WDR47O94967 919 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 NSA2O95478 260 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 HPP00738 406 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 CCDC166P0CW27 439 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 COX6A1P12074 109 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 STMN1P16949 149 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 VARSP26640 1264 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 XCR1P46094 333 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 GLRBP48167 497 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 EFNA3P52797 238 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 OLR1P78380 273 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 AGAP7PQ5VUJ5 663 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 TMEM214Q6NUQ4 689 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 ADAMTSL2Q86TH1 951 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 HPS6Q86YV9 775 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 OR51Q1Q8NH59 317 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 TM9SF4Q92544 642 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 NACC2Q96BF6 587 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 TM4SF19Q96DZ7 209 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 C19orf60Q96EN9 201 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 PEX11GQ96HA9 241 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 UBXN10Q96LJ8 280 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 MAGEB10Q96LZ2 347 aaPredicted RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 AGAP4Q96P64 663 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 DERL2Q9GZP9 239 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 EPB41L4BQ9H329 900 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 WWOXQ9NZC7 414 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 PTGFRNQ9P2B2 879 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 NOVA2Q9UNW9 492 aaKnown RBP12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 CNTRLQ7Z7A1 2325 aa12.9□□□□□ -0.34
VPS9D1-204ENST00000565023 TRBC2A0A5B9 178 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 H0YIG0 161 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 BMP10O95393 424 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 F10P00742 488 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 INHBAP08476 426 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 CRABP2P29373 138 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 ATG9BQ674R7 924 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 RAPH1Q70E73 1250 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 NDUFAF7Q7L592 441 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 CMC1Q7Z7K0 106 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 PDSS2Q86YH6 399 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 IQCKQ8N0W5 287 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 ABHD11Q8NFV4 315 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 UHMK1Q8TAS1 419 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 DNAJB14Q8TBM8 379 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 BRIX1Q8TDN6 353 aaKnown RBP12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 METTL21AQ8WXB1 218 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 CCT6BQ92526 530 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 ESAMQ96AP7 390 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 VN1R1Q9GZP7 353 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 EPS8L2Q9H6S3 715 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 ZNF180Q9UJW8 692 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 B3GNT3Q9Y2A9 372 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 KCNE2Q9Y6J6 123 aa12.89□□□□□ -0.35
VPS9D1-204ENST00000565023 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms