RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 AGPAT4Q9NRZ5 378 aa9.47□□□□□ -0.89
CMTM3-209ENST00000565003 PLEKHB1Q9UF11 243 aaPredicted RBP9.47□□□□□ -0.89
CMTM3-209ENST00000565003 SLC22A14Q9Y267 594 aa9.47□□□□□ -0.89
CMTM3-209ENST00000565003 SLC22A7Q9Y694 548 aa9.47□□□□□ -0.89
CMTM3-209ENST00000565003 PRRC2CQ9Y520 2896 aaKnown RBP9.47□□□□□ -0.89
CMTM3-209ENST00000565003 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.89
CMTM3-209ENST00000565003 SVILO95425 2214 aa9.46□□□□□ -0.89
CMTM3-209ENST00000565003 A1L4Q6 167 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 DYTNA2CJ06 578 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 CXorf49A8MYA2 514 aaPredicted RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 RAD51CO43502 376 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 GALR3O60755 368 aaPredicted RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 WFS1O76024 890 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 WDPCPO95876 746 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 B3GALT4O96024 378 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 LDLRP01130 860 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SERPIND1P05546 499 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 UQCRHP07919 91 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 CYC1P08574 325 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SSTR1P30872 391 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SCTRP47872 440 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 OLR1P78380 273 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 REEP5Q00765 189 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 RHAGQ02094 409 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 C2orf54Q08AI8 447 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 ELOAQ14241 798 aaKnown RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 CSHL1Q14406 222 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 ABRAXAS2Q15018 415 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 HERC3Q15034 1050 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 TSNQ15631 228 aaKnown RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 C18orf21Q32NC0 220 aaPredicted RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 DEFB134Q4QY38 66 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 C17orf53Q8N3J3 647 aaPredicted RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 NKAPQ8N5F7 415 aaKnown RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 ANKRD53Q8N9V6 530 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SPATA4Q8NEY3 305 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 METTL21AQ8WXB1 218 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 ANKRD7Q92527 254 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 HAS2Q92819 552 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 TSLPQ969D9 159 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 PEX11GQ96HA9 241 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SLX1AQ9BQ83 275 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 UNKQ9C0B0 810 aaKnown RBP9.46□□□□□ -0.9
CMTM3-209ENST00000565003 GPAMQ9HCL2 828 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 LANCL2Q9NS86 450 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 GRHL1Q9NZI5 618 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 ZFP69BQ9UJL9 534 aa9.46□□□□□ -0.9
CMTM3-209ENST00000565003 SCN2AQ99250 2005 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 TRAV17A0A0B4J275 112 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 FAM187AA6NFU0 413 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 WIPF3A6NGB9 483 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 C4orf51C9J302 202 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 WISP3O95389 354 aaPredicted RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ZNF888P0CJ79 500 aaPredicted RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ICAM2P13598 275 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ALOX12P18054 663 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 AHRP35869 848 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 AGTR2P50052 363 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 CDKL1Q00532 357 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ZNF33BQ06732 778 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 HYAL2Q12891 473 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 BTBD16Q32M84 506 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 PLAG1Q6DJT9 500 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 RPUSD3Q6P087 351 aaKnown RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 FAM180AQ6UWF9 173 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ADAMTSL2Q86TH1 951 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 SPATA6LQ8N4H0 392 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 BBOF1Q8ND07 529 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 NT5CQ8TCD5 201 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 UTP15Q8TED0 518 aaKnown RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 PYROXD1Q8WU10 500 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 MAGEB10Q96LZ2 347 aaPredicted RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 OR1F2PQ96R84 312 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 TAAR6Q96RI8 345 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 EGFL8Q99944 293 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 AICDAQ9GZX7 198 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 RNF32Q9H0A6 362 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 CAB39LQ9H9S4 337 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 PELI2Q9HAT8 420 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 POPDC3Q9HBV1 291 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 SAYSD1Q9NPB0 183 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 NSMCE4AQ9NXX6 385 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 WHRNQ9P202 907 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 C19orf25Q9UFG5 118 aaPredicted RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 SLC5A6Q9Y289 635 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 MTO1Q9Y2Z2 717 aaKnown RBP9.45□□□□□ -0.9
CMTM3-209ENST00000565003 DYRK1BQ9Y463 629 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 OARD1Q9Y530 152 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 KCNE2Q9Y6J6 123 aa9.45□□□□□ -0.9
CMTM3-209ENST00000565003 TCRBV9S1A1TA0A576 114 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 OR5H15A6NDH6 313 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NCF1BA6NI72 391 aaPredicted RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NCF1CA8MVU1 366 aaPredicted RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 MAGEB17A8MXT2 336 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 NDC80O14777 642 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 EIF3HO15372 352 aaKnown RBP eCLIP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 PHGDHO43175 533 aaKnown RBP9.44□□□□□ -0.9
CMTM3-209ENST00000565003 CHST10O43529 356 aa9.44□□□□□ -0.9
CMTM3-209ENST00000565003 MAN1A2O60476 641 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms