RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MYRIPQ8NFW9 859 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 NT5CQ8TCD5 201 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 STARD8Q92502 1023 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 APOPT1Q96IL0 206 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 FAR2Q96K12 515 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 MAGEB10Q96LZ2 347 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-208ENST00000564703 C10orf90Q96M02 699 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 ACTL8Q9H568 366 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 SYNPO2LQ9H987 977 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 SEMA4BQ9NPR2 832 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF282Q9UDV7 671 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF490Q9ULM2 529 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-208ENST00000564703 SLC22A7Q9Y694 548 aa15.2■□□□□ 0.02
RAB40C-208ENST00000564703 PLIN3O60664 434 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 CLEC3AO75596 197 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ONECUT2O95948 504 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 RECKO95980 971 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 OTCP00480 354 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PROCP04070 461 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 EPORP19235 508 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ITGAXP20702 1163 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 FBLP22087 321 aaKnown RBP15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PRKAA2P54646 552 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 NAA20P61599 178 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PHEXP78562 749 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 NFKB2Q00653 900 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ASPHQ12797 758 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ERV3-1Q14264 604 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 COL28A1Q2UY09 1125 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 CFAP157Q5JU67 520 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 TTC19Q6DKK2 380 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-208ENST00000564703 GRHL2Q6ISB3 625 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 TMEM214Q6NUQ4 689 aaKnown RBP15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ZYG11AQ6WRX3 759 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 SYVN1Q86TM6 617 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 CCNYL1Q8N7R7 359 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 ZCCHC10Q8TBK6 192 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 FKBP10Q96AY3 582 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 MOCOSQ96EN8 888 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 COPG2Q9UBF2 871 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 TRPC4Q9UBN4 977 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PCTPQ9UKL6 214 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 TCFL5Q9UL49 500 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PLLPQ9Y342 182 aa15.19■□□□□ 0.02
RAB40C-208ENST00000564703 PTRH2Q9Y3E5 179 aaKnown RBP15.19■□□□□ 0.02
RAB40C-208ENST00000564703 MRPS18BQ9Y676 258 aaKnown RBP15.19■□□□□ 0.02
RAB40C-208ENST00000564703 SCN3AQ9NY46 2000 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 A0A088AWK7 358 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 H0YIG0 161 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 NKX2-8O15522 239 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 FOXS1O43638 330 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 PRAMEF4O60810 478 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 SPAG7O75391 227 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 NSA2O95478 260 aaKnown RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 MLYCDO95822 493 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 ALOX12P18054 663 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF10P21506 573 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 FOLR3P41439 243 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CDH13P55290 713 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CLCQ05315 142 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 TGM3Q08188 693 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CPSF6Q16630 551 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 TOR1AIP1Q5JTV8 583 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF678Q5SXM1 525 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 PRAMEF9Q5VWM5 478 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CHSY3Q70JA7 882 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 SRFBP1Q8NEF9 429 aaKnown RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 OR9A4Q8NGU2 314 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CREB3L4Q8TEY5 395 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 SREK1Q8WXA9 508 aaKnown RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 PGM2Q96G03 612 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 NTMT1Q9BV86 223 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 C1QTNF3Q9BXJ4 246 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 RHBGQ9H310 441 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 MKS1Q9NXB0 559 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 NXT1Q9UKK6 140 aaKnown RBP15.18■□□□□ 0.02
RAB40C-208ENST00000564703 EMCNQ9ULC0 261 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
RAB40C-208ENST00000564703 G3V2L1 256 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 OR7A17O14581 309 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 TERTO14746 1132 aaKnown RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MED26O95402 600 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CAPN1P07384 714 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 RPS17P08708 135 aaKnown RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 ZNF888P0CJ79 500 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 PRKAR1AP10644 381 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 IL1RNP18510 177 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CD22P20273 847 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 RAB8AP61006 207 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 RPS18P62269 152 aaKnown RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 DSG2Q14126 1118 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 E2F2Q14209 437 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 SSPNQ14714 243 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CASP8Q14790 479 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 CRTC2Q53ET0 693 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-208ENST00000564703 UNC50Q53HI1 259 aa15.17■□□□□ 0.02
RAB40C-208ENST00000564703 MRPL14Q6P1L8 145 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms