RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RNF121Q9H920 327 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 KLK11Q9UBX7 282 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 CLIP2Q9UDT6 1046 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 FBXL4Q9UKA2 621 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 PLCL2Q9UPR0 1127 aa2.46□□□□□ -2.02
HMGB1P33-201ENST00000563485 UMODL1Q5DID0 1318 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 IGHV3-16A0A0C4DH30 117 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 IQCMA0A1B0GVH7 501 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 TRBC2A0A5B9 178 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 A8MVM7 634 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 K7EQG2 157 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 RNF103O00237 685 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 OR52Z1P0C646 297 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 ABCE1P61221 599 aaKnown RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 CACNG1Q06432 222 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 MLF2Q15773 248 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 HYIQ5T013 277 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 SPATA1Q5VX52 437 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 NAA16Q6N069 864 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 ANKRD33Q7Z3H0 272 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 CARM1Q86X55 608 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 MAML2Q8IZL2 1156 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 C11orf42Q8N5U0 333 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 POGLUT1Q8NBL1 392 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 CASP10Q92851 521 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 PYCR2Q96C36 320 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 PGM2Q96G03 612 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 SERAC1Q96JX3 654 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 LRRC3BQ96PB8 259 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 TAAR6Q96RI8 345 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 XAB2Q9HCS7 855 aaKnown RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 ABCD2Q9UBJ2 740 aa2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZNF256Q9Y2P7 627 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P33-201ENST00000563485 COL16A1Q07092 1604 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 RPL37AP8A6NKH3 93 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 YES1P07947 543 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 STAG3L1P0CL83 205 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 NR2F1P10589 423 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 LYZP61626 148 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 BTG1P62324 171 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ACY1Q03154 408 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ITPK1Q13572 414 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 RUNX3Q13761 415 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 RBBP7Q16576 425 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 SPANXN4Q5MJ08 99 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ATAD3CQ5T2N8 411 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ARMC4Q5T2S8 1044 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 MZT2BQ6NZ67 158 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 CCBE1Q6UXH8 406 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 C5orf24Q7Z6I8 188 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 PIGWQ7Z7B1 504 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZC3H3Q8IXZ2 948 aaKnown RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 OR5M9Q8NGP3 310 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 MRAPQ8TCY5 172 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 SEPT1Q8WYJ6 367 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 SPSB1Q96BD6 273 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 RBM41Q96IZ5 413 aaKnown RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 SPATA33Q96N06 139 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 ZIM3Q96PE6 472 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 HNRNPABQ99729 332 aaKnown RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 RBM24Q9BX46 236 aaKnown RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 LRRCC1Q9C099 1032 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 PHPT1Q9NRX4 125 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 CLEC5AQ9NY25 188 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 POLKQ9UBT6 870 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 COLEC10Q9Y6Z7 277 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 SPATA31D1Q6ZQQ2 1576 aa2.44□□□□□ -2.02
HMGB1P33-201ENST00000563485 TRGV8A0A0C4DH27 118 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 E9PAM4 449 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 H3BMM5 538 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 TXNL1O43396 289 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 TNFSF12O43508 249 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 VENTXO95231 258 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 FAM200BP0CF97 657 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 FDPSP14324 419 aaKnown RBP2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 GIFP27352 417 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 HSD17B3P37058 310 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 CLDN17P56750 224 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 IFI35P80217 286 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 Q1RN00 199 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 C9orf152Q5JTZ5 239 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 WDR78Q5VTH9 848 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 TTC27Q6P3X3 843 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 Q6ZVH6 145 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 TMUB2Q71RG4 321 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 PLPPR4Q7Z2D5 763 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 RPAINQ86UA6 219 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 DND1Q8IYX4 353 aaKnown RBP2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 CCDC63Q8NA47 563 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 POMGNT2Q8NAT1 580 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 XXYLT1Q8NBI6 393 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 ITLN1Q8WWA0 313 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 NABP1Q96AH0 204 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 IL12RB2Q99665 862 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 MOB1AQ9H8S9 216 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 ANAPC11Q9NYG5 84 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 PKD2L2Q9NZM6 624 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 NYAP2Q9P242 653 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 MORF4L1Q9UBU8 362 aa2.43□□□□□ -2.02
HMGB1P33-201ENST00000563485 NAALAD2Q9Y3Q0 740 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms