RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 GALNT16Q8N428 558 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ARFGAP2Q8N6H7 521 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC44A5Q8NCS7 719 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ADPRHL1Q8NDY3 354 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 OR4A16Q8NH70 328 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 XAGE5Q8WWM1 108 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DPF1Q92782 380 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ULK4Q96C45 1275 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ZC3HAV1LQ96H79 300 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DHTKD1Q96HY7 919 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 LRR1Q96L50 414 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ANKRD27Q96NW4 1050 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BTBD9Q96Q07 612 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 GPA33Q99795 319 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CPPED1Q9BRF8 314 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CINPQ9BW66 212 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TPSD1Q9BZJ3 242 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MAGT1Q9H0U3 335 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PSTPIP2Q9H939 334 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 FN3KRPQ9HA64 309 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CALHM2Q9HA72 323 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PARVGQ9HBI0 331 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TUBG2Q9NRH3 451 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ADAMTS5Q9UNA0 930 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PADI2Q9Y2J8 665 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DOCK2Q92608 1830 aa4.96□□□□□ -1.61
VPS35P1-201ENST00000563400 POLR2AP24928 1970 aaKnown RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 LOC100506127A0A0U1RQW1 187 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 VGLL3A8MV65 326 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ALOX15BO15296 676 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF208O43345 1280 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 PDE9AO76083 593 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 GNA14O95837 355 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ADH4P08319 380 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 NR2F6P10588 404 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ETFAP13804 333 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 GATA3P23771 443 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ADRA1AP35348 466 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC1A6P48664 564 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CXCR3P49682 368 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 NAPAP54920 295 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 PLTPP55058 493 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 SLC8A3P57103 927 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 GSDMDP57764 484 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CAP1Q01518 475 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 FPGSQ05932 587 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ARHGAP1Q07960 439 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 FUT7Q11130 342 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 TROAPQ12815 778 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ORC2Q13416 577 aaPredicted RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CARTPTQ16568 116 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 PNLIPRP3Q17RR3 467 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ANKRD55Q3KP44 614 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 Q3ZCU0 254 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 MPPE1Q53F39 396 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 KIAA1161Q6NSJ0 714 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CES5AQ6NT32 575 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 BTNL8Q6UX41 500 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 DPPA4Q7L190 304 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CLNKQ7Z7G1 428 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 LRRC49Q8IUZ0 686 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 LAX1Q8IWV1 398 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ADGRF4Q8IZF3 695 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF808Q8N4W9 903 aaPredicted RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 BBS1Q8NFJ9 593 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 EXD1Q8NHP7 514 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 BBS10Q8TAM1 723 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 GOLGA5Q8TBA6 731 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 FEZF2Q8TBJ5 459 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM170AQ8WVE7 144 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 TRIB2Q92519 343 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 OSTF1Q92882 214 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 TMEM125Q96AQ2 219 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ISG20Q96AZ6 181 aaKnown RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 RSPRY1Q96DX4 576 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ARL5BQ96KC2 179 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 PANX2Q96RD6 677 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 OSBPL9Q96SU4 736 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ACOX2Q99424 681 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ABHD14AQ9BUJ0 271 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 FICDQ9BVA6 458 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CYP3A43Q9HB55 503 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 DNAJC4Q9NNZ3 241 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 IL17RBQ9NRM6 502 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 STK39Q9UEW8 545 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 CHMP2BQ9UQN3 213 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 MRPS33Q9Y291 106 aaKnown RBP4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ZNF510Q9Y2H8 683 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 SH3GLB1Q9Y371 365 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 Q9Y3F1 56 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 IRAK3Q9Y616 596 aa4.96□□□□□ -1.62
VPS35P1-201ENST00000563400 ADAMTSL1Q8N6G6 1762 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 PRAMEF33A0A0G2JMD5 474 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A0U1RQS6 177 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A1W2PPQ1 181 aa4.95□□□□□ -1.62
VPS35P1-201ENST00000563400 A0A1W2PS29 197 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms