RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-203ENST00000562609 GPR83Q9NYM4 423 aa13.55□□□□□ -0.24
GTF3C1-203ENST00000562609 PDP1Q9P0J1 537 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-203ENST00000562609 GREB1Q4ZG55 1949 aa13.55□□□□□ -0.24
GTF3C1-203ENST00000562609 MUSKO15146 869 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 PLA2G10O15496 165 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CREG1O75629 220 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 DIRAS1O95057 198 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GJB5O95377 273 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ADRA1AP35348 466 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 RPS19P39019 145 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 TGM4P49221 684 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 PDZK1Q5T2W1 519 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CACHD1Q5VU97 1274 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 AFMIDQ63HM1 303 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MSANTD2Q6P1R3 559 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF782Q6ZMW2 699 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 Q6ZPB1 254 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 C1orf74Q96LT6 269 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CNPPD1Q9BV87 410 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 KCTD3Q9Y597 815 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 DNMT3AQ9Y6K1 912 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 RFPL3O75679 317 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MRPL19P49406 292 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MAP2K6P52564 334 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GEMP55040 296 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 LCP2Q13094 533 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 C7orf57Q8NEG2 295 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CLHC1Q8NHS4 586 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ST8SIA4Q92187 359 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MAGIXQ9H6Y5 334 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 PAK6Q9NQU5 681 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GKN1Q9NS71 199 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MRPL39Q9NYK5 338 aaKnown RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 TAS2R16Q9NYV7 291 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ABCG2Q9UNQ0 655 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CLCA3PQ9Y6N3 262 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MIA3Q5JRA6 1907 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 OR51F1A6NGY5 319 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MYL12BO14950 172 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 SLC2A3P11169 496 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 RHOQP17081 205 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 MYL12AP19105 171 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 CSNK2BP67870 215 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 SEMA3AQ14563 771 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 OR4D1Q15615 310 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GPAT4Q86UL3 456 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 STX19Q8N4C7 294 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 GDPD1Q8N9F7 314 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 EXOC2Q96KP1 924 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ASPNQ9BXN1 380 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF490Q9ULM2 529 aaPredicted RBP13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF175Q9Y473 711 aa13.54□□□□□ -0.24
GTF3C1-203ENST00000562609 UNC80Q8N2C7 3258 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 MYO7AQ13402 2215 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 CLCA1A8K7I4 914 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 H3BM21 787 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 PSPHP78330 225 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 OLR1P78380 273 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 NRG1Q02297 640 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 ZNF33AQ06730 810 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 NPRL3Q12980 569 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 MED22Q15528 200 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 SLC14A2Q15849 920 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 HKDC1Q2TB90 917 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 ANKRD54Q6NXT1 300 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 GCNT7Q6ZNI0 430 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 GPR149Q86SP6 731 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 PHACTR4Q8IZ21 702 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 DNAJC22Q8N4W6 341 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 OR52H1Q8NGJ2 320 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 PYURFQ96I23 114 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 GPR137Q96N19 417 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 COL21A1Q96P44 957 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 IL1RAPQ9NPH3 570 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 SNTG1Q9NSN8 517 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 TREX1Q9NSU2 369 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 RIMKLBQ9ULI2 386 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 GRXCR2A6NFK2 248 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 ARNTLO00327 626 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 NUPL2O15504 423 aaKnown RBP13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 RAMP2O60895 175 aa13.53□□□□□ -0.24
GTF3C1-203ENST00000562609 FKTNO75072 461 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms