RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ANKHQ9HCJ1 492 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 MMP25Q9NPA2 562 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 LANCL2Q9NS86 450 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 CCM2LQ9NUG4 571 aaPredicted RBP10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 COQ3Q9NZJ6 369 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 ADAMTS6Q9UKP5 1117 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 RIMKLBQ9ULI2 386 aa10.96□□□□□ -0.65
NSMCE1-202ENST00000561960 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 ERI2A8K979 691 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FANCGO15287 622 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CCNDBP1O95273 360 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 KCNJ1P48048 391 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CLCN7P51798 805 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 EMP3P54852 163 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 AP2B1P63010 937 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 TFF3Q07654 80 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 PMPCAQ10713 525 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CTBP1Q13363 440 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 PTK6Q13882 451 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FAM53BQ14153 422 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CEBPEQ15744 281 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 EXT1Q16394 746 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 DEFB134Q4QY38 66 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 TMEM214Q6NUQ4 689 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CASC4Q6P4E1 433 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF549Q6P9A3 640 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 UBE2R2Q712K3 238 aaPredicted RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 CENPUQ71F23 418 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 MDGA2Q7Z553 956 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 RPS19BP1Q86WX3 136 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 SULF2Q8IWU5 870 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 LRRC56Q8IYG6 542 aaPredicted RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FAM98AQ8NCA5 519 aaKnown RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FBXO15Q8NCQ5 510 aaPredicted RBP10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 SEC16BQ96JE7 1060 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 LPAR4Q99677 370 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF559Q9BR84 538 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 FAM114A2Q9NRY5 505 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 IGSF5Q9NSI5 407 aa10.95□□□□□ -0.66
NSMCE1-202ENST00000561960 MPDZO75970 2070 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 CTAGE9A4FU28 777 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 PINLYPA6NC86 204 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 H0YIG0 161 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 NDUFS4O43181 175 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 TOXO94900 526 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 MLYCDO95822 493 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF888P0CJ79 500 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 CD1EP15812 388 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 PPP2R1BP30154 601 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 NUP107P57740 925 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 TAS2R50P59544 299 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 NAA25Q14CX7 972 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 CMPK2Q5EBM0 449 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 SEL1L2Q5TEA6 688 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF470Q6ECI4 717 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 SDCCAG8Q86SQ7 713 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 ASPGQ86U10 573 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 LRRC6Q86X45 466 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 ZNF740Q8NDX6 193 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 MCOLN3Q8TDD5 553 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 SLC13A3Q8WWT9 602 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 PYCR2Q96C36 320 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 MRFAP1L1Q96HT8 127 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 GPR21Q99679 349 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 SMR3AQ99954 134 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 CCDC177Q9NQR7 707 aaPredicted RBP10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 MED16Q9Y2X0 877 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 LIPGQ9Y5X9 500 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 MRFAP1Q9Y605 127 aa10.94□□□□□ -0.66
NSMCE1-202ENST00000561960 A0A0G2JN53 185 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 TRBV11-1A0A0K0K1C0 115 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 NPIPA2E9PIF3 369 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 NPIPA3F8WFD2 350 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 GOLGA8MH3BSY2 632 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 TXNDC9O14530 226 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 CHST10O43529 356 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 PEX1O43933 1283 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 PHF2O75151 1096 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 ZWINTO95229 277 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 IPO7O95373 1038 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 FHP07954 510 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 TFEBP19484 476 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 MSX1P28360 303 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 CYB561P49447 251 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 AGTR2P50052 363 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 RPS15AP62244 130 aaKnown RBP10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 MPP1Q00013 466 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 EMC4Q5J8M3 183 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 MEI1Q5TIA1 1274 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 ANKRD22Q5VYY1 191 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 CAPN13Q6MZZ7 669 aaPredicted RBP10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 MRNIPQ6NTE8 343 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 GSTA5Q7RTV2 222 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 ZZZ3Q8IYH5 903 aa10.93□□□□□ -0.66
NSMCE1-202ENST00000561960 ACBD4Q8NC06 268 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms