RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 CAPN12Q6ZSI9 719 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 LANCL3Q6ZV70 420 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 ANKRD37Q7Z713 158 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 CTAGE6Q86UF2 777 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 THOC6Q86W42 341 aaKnown RBP9.71□□□□□ -0.86
CLK3-205ENST00000561673 BBOF1Q8ND07 529 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 SPATA4Q8NEY3 305 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 PYROXD1Q8WU10 500 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 FAR1Q8WVX9 515 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 SLC5A11Q8WWX8 675 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 ANKRD7Q92527 254 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 ERP44Q9BS26 406 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 TUBB6Q9BUF5 446 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 SPNS1Q9H2V7 528 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 STMN3Q9NZ72 180 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 ERRFI1Q9UJM3 462 aaPredicted RBP9.71□□□□□ -0.86
CLK3-205ENST00000561673 SLC22A14Q9Y267 594 aa9.71□□□□□ -0.86
CLK3-205ENST00000561673 MDC1Q14676 2089 aaKnown RBP9.71□□□□□ -0.86
CLK3-205ENST00000561673 DOCK10Q96BY6 2186 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 ZNF860A6NHJ4 632 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 NDC80O14777 642 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 RAD51CO43502 376 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 GALR3O60755 368 aaPredicted RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 CDC123O75794 336 aaPredicted RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 DDAH2O95865 285 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 WDPCPO95876 746 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 B3GALT4O96024 378 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 ALOX12P18054 663 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 IL10P22301 178 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 SSTR1P30872 391 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 AHRP35869 848 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 SCTRP47872 440 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 AP2B1P63010 937 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 CDKL1Q00532 357 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 RHAGQ02094 409 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 ELOAQ14241 798 aaKnown RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 TSNQ15631 228 aaKnown RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 C18orf21Q32NC0 220 aaPredicted RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 PLAG1Q6DJT9 500 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 RPUSD3Q6P087 351 aaKnown RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 NXPE4Q6UWF7 544 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 MAATS1Q7Z4T9 603 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 SPATA6LQ8N4H0 392 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 ANKRD53Q8N9V6 530 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 PLPP5Q8NEB5 264 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 NT5CQ8TCD5 201 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 PEX11GQ96HA9 241 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 VPS39Q96JC1 886 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 RBCK1Q9BYM8 510 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 DPH5Q9H2P9 285 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 RHOJQ9H4E5 214 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 SAYSD1Q9NPB0 183 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 LANCL2Q9NS86 450 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 NSMCE4AQ9NXX6 385 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 WHRNQ9P202 907 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 PLEKHB1Q9UF11 243 aaPredicted RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 C19orf25Q9UFG5 118 aaPredicted RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 ZFP69BQ9UJL9 534 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 SLC5A6Q9Y289 635 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 MTO1Q9Y2Z2 717 aaKnown RBP9.7□□□□□ -0.86
CLK3-205ENST00000561673 DYRK1BQ9Y463 629 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 OARD1Q9Y530 152 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 CRYBG3Q68DQ2 2970 aa9.7□□□□□ -0.86
CLK3-205ENST00000561673 CELSR2Q9HCU4 2923 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 TRAV17A0A0B4J275 112 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 A8MUI8 341 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 E2F3O00716 465 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CHST10O43529 356 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 WISP3O95389 354 aaPredicted RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 LDLRP01130 860 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 UQCRHP07919 91 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 FHP07954 510 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ZNF888P0CJ79 500 aaPredicted RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 EDN3P14138 238 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 HNF4AP41235 474 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 GDF5P43026 501 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 AGTR2P50052 363 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 HNMTP50135 292 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 OLR1P78380 273 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 REEP5Q00765 189 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 POU4F1Q01851 419 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ZNF33BQ06732 778 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 RGS1Q08116 209 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 C2orf54Q08AI8 447 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 HYAL2Q12891 473 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 CALCOCO2Q13137 446 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ESPL1Q14674 2120 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ABRAXAS2Q15018 415 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 RBBP5Q15291 538 aaKnown RBP9.69□□□□□ -0.86
CLK3-205ENST00000561673 NSDHLQ15738 373 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 BTBD16Q32M84 506 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 DEFB134Q4QY38 66 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 C4orf17Q53FE4 359 aa9.69□□□□□ -0.86
CLK3-205ENST00000561673 ABHD17BQ5VST6 288 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms