RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 TXNDC9O14530 226 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 DUX1O43812 170 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 PCDH7O60245 1069 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 PCDHGA12O60330 932 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 GUCY1B2O75343 617 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 SH3BGRLO75368 114 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 DNAJC8O75937 253 aaPredicted RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 ETHE1O95571 254 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 NPPAP01160 153 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 SLC35G6P0C7Q6 338 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 TIA1P31483 386 aaKnown RBP eCLIP9.85□□□□□ -0.83
USP3-219ENST00000561326 RPL3P39023 403 aaKnown RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 BCL6P41182 706 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 CPA2P48052 419 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 DUSP3P51452 185 aaPredicted RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 CYP4F2P78329 520 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 SRSF11Q05519 484 aaKnown RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 ZIC1Q15915 447 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 DPY19L1Q2PZI1 675 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 INAVAQ3KP66 663 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 COQ5Q5HYK3 327 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FCRL6Q6DN72 434 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 ADNP2Q6IQ32 1131 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FBXO42Q6P3S6 717 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 RINLQ6ZS11 566 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 GK5Q6ZS86 529 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 ASRGL1Q7L266 308 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 KANSL1Q7Z3B3 1105 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 COMMD6Q7Z4G1 85 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 ZNF438Q7Z4V0 828 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 VN1R5Q7Z5H4 357 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 TRIM73Q86UV7 250 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 GATAD2AQ86YP4 633 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 PLXDC1Q8IUK5 500 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 PLD3Q8IV08 490 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FUNDC1Q8IVP5 155 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 CARFQ8N187 725 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FAM181AQ8N9Y4 354 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 SLC13A3Q8WWT9 602 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 RSC1A1Q92681 617 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 SLC7A6OSQ96CW6 309 aaPredicted RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 SPDL1Q96EA4 605 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 TCTN2Q96GX1 697 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 FCRL1Q96LA6 429 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 F2RL3Q96RI0 385 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 ZFYVE21Q9BQ24 234 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 GTPBP2Q9BX10 602 aaKnown RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 REXO4Q9GZR2 422 aaKnown RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 ABCG4Q9H172 646 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 ARRDC1-AS1Q9H2J1 176 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 IL21RQ9HBE5 538 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 TAS2R1Q9NYW7 299 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 MCM8Q9UJA3 840 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 LEF1Q9UJU2 399 aaPredicted RBP9.85□□□□□ -0.83
USP3-219ENST00000561326 ADAM29Q9UKF5 820 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 DLGAP4Q9Y2H0 992 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 KLHL20Q9Y2M5 609 aa9.85□□□□□ -0.83
USP3-219ENST00000561326 IGHV1OR21-1A0A087WYE8 117 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 A0A088AWK7 358 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TLCD2A6NGC4 264 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 PATE3B3GLJ2 98 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 H0YHG0 523 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 SAP18O00422 153 aaKnown RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 MRASO14807 208 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 NDUFS4O43181 175 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 SIGLEC6O43699 453 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 SRPX2O60687 465 aaPredicted RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 KLK1P06870 262 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 ZNF883P0CG24 379 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 GIMD1P0DJR0 217 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 SDC1P18827 310 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 ZNF10P21506 573 aaPredicted RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 TSFMP43897 325 aaKnown RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 NUDT2P50583 147 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 OR1D5P58170 312 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 CYP4F3Q08477 520 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 ZNF763Q0D2J5 394 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 RCAN2Q14206 197 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 PTGR1Q14914 329 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 NR1D2Q14995 579 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 SPRED3Q2MJR0 410 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 VPS26BQ4G0F5 336 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TOR1AIP1Q5JTV8 583 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 CCNYL2Q5T2Q4 361 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 OR4C11Q6IEV9 310 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TRIM40Q6P9F5 258 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 R3HCC1LQ7Z5L2 792 aaKnown RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 ASPGQ86U10 573 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TMEM132CQ8N3T6 1108 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 EID2Q8N6I1 236 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 RBM15BQ8NDT2 890 aaKnown RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 VPS37AQ8NEZ2 397 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 OR2L5Q8NG80 312 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 OR9I1Q8NGQ6 314 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 DNAJB8Q8NHS0 232 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 NT5CQ8TCD5 201 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 CREB3L4Q8TEY5 395 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 NAT6Q93015 286 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TESCQ96BS2 214 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms