RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CLEC3AO75596 197 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 STK17BO94768 372 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 MED26O95402 600 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TGFB1P01137 390 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 CHRNGP07510 517 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SERPINA6P08185 405 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 HBQ1P09105 142 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SLC35G6P0C7Q6 338 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 GRK2P25098 689 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 GSTM2P28161 218 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ARRB2P32121 409 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 PIK3CBP42338 1070 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 GCGRP47871 477 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ATP1A2P50993 1020 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 RGS1Q08116 209 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 HYAL2Q12891 473 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 STX3Q13277 289 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 DDX39BQ13838 428 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 RCN2Q14257 317 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 PRTGQ2VWP7 1150 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SGO1Q5FBB7 561 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 YOD1Q5VVQ6 348 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 FAM219BQ5XKK7 198 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 RHBDD2Q6NTF9 364 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ATG14Q6ZNE5 492 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TIPARPQ7Z3E1 657 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 VN1R5Q7Z5H4 357 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ZFAND4Q86XD8 727 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 RNF175Q8N4F7 328 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 HUS1BQ8NHY5 278 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 WDR20Q8TBZ3 569 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 NT5CQ8TCD5 201 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF473Q8WTR7 871 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 REPS1Q96D71 796 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SEC16BQ96JE7 1060 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF578Q96N58 590 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 KCNA7Q96RP8 456 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 C20orf27Q9GZN8 174 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 KLHL31Q9H511 634 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 MANSC1Q9H8J5 431 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 ZNF395Q9H8N7 513 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 EML4Q9HC35 981 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 PRM3Q9NNZ6 103 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TNFRSF12AQ9NP84 129 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 THSD1Q9NS62 852 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 FARSBQ9NSD9 589 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 CUTCQ9NTM9 273 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TXLNGQ9NUQ3 528 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 DHCR7Q9UBM7 475 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 NDOR1Q9UHB4 597 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TRPS1Q9UHF7 1281 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SNX6Q9UNH7 406 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 TMEM184BQ9Y519 407 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SDK2Q58EX2 2172 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 CNOT1A5YKK6 2376 aaKnown RBP9.79□□□□□ -0.84
LRRC28-221ENST00000561276 SPTBP11277 2137 aa9.79□□□□□ -0.84
LRRC28-221ENST00000561276 URADA6NGE7 173 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 MAGEB17A8MXT2 336 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 TMEM114B3SHH9 223 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 MANBAO00462 879 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 CPNE3O75131 537 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SH3BGRLO75368 114 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 ULK1O75385 1050 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 LYPLA1O75608 230 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 HSPA4LO95757 839 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 TBX6O95947 436 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 PDYNP01213 254 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 KRT6AP02538 564 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 KRT6BP04259 564 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SERPINE1P05121 402 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 ENO1P06733 434 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 KLK3P07288 261 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 FGF4P08620 206 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 CCNYL3P0C7X3 344 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 PTX3P26022 381 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SERPINB3P29508 390 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 HMOX2P30519 316 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 HNRNPH1P31943 449 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SERPINB5P36952 375 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SLC1A6P48664 564 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 KRT6CP48668 564 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 FOXA1P55317 472 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 ABCE1P61221 599 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 SNRPNP63162 240 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 ABHD18Q0P651 414 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 BST1Q10588 318 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 IFT88Q13099 833 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 FAM53BQ14153 422 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 NDUFA9Q16795 377 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 TOR1AIP1Q5JTV8 583 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 C1orf189Q5VU69 101 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 GARNL3Q5VVW2 1013 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 FRG2Q64ET8 278 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 CLEC6AQ6EIG7 209 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 TMEM214Q6NUQ4 689 aaKnown RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 C6orf15Q6UXA7 325 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-221ENST00000561276 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 CUZD1Q86UP6 607 aa9.78□□□□□ -0.84
LRRC28-221ENST00000561276 TRIM42Q8IWZ5 723 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms