RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 C14orf105Q9NVL8 296 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 GEMIN8Q9NWZ8 242 aaKnown RBP10.21□□□□□ -0.77
TPM1-229ENST00000561242 COPG2Q9UBF2 871 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 SLC22A7Q9Y694 548 aa10.21□□□□□ -0.77
TPM1-229ENST00000561242 ZNF106Q9H2Y7 1883 aaKnown RBP10.21□□□□□ -0.78
TPM1-229ENST00000561242 SCN8AQ9UQD0 1980 aa10.21□□□□□ -0.78
TPM1-229ENST00000561242 A0A0A6YYC8 382 aaPredicted RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 WDR91A4D1P6 747 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 CDC14CA4D256 554 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 FITM1A5D6W6 292 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 SYNDIG1LA6NDD5 238 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 HMGB1P1B2RPK0 211 aaPredicted RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 I3L1I5 382 aaPredicted RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 PCDH17O14917 1159 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ERI3O43414 337 aaKnown RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 KLK8O60259 260 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 DLX3O60479 287 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ESRRBO95718 433 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 HSPA4LO95757 839 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 TGFB1P01137 390 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 PROCP04070 461 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ZNF28P17035 718 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 DDX5P17844 614 aaKnown RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 OTX2P32243 289 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 SERPINB5P36952 375 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 GMPRP36959 345 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 PIK3CBP42338 1070 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 CASP2P42575 452 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 SSR2P43308 183 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 PLA2G16P53816 162 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 CDH13P55290 713 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 MAGOHP61326 146 aaKnown RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 NFKB2Q00653 900 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ERV3-1Q14264 604 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 SSPNQ14714 243 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 SLC9A5Q14940 896 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ZRSR2Q15696 482 aaKnown RBP10.2□□□□□ -0.78
TPM1-229ENST00000561242 MINDY4Q4G0A6 757 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 DEFB134Q4QY38 66 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 ZNF678Q5SXM1 525 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 C6orf163Q5TEZ5 329 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 AGBL2Q5U5Z8 902 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 OVCH1Q7RTY7 1134 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 BANPQ8N9N5 519 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 NT5CQ8TCD5 201 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 MGARPQ8TDB4 240 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 CT55Q8WUE5 264 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 THAP4Q8WY91 577 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 FKBP10Q96AY3 582 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 RNF31Q96EP0 1072 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 FER1L6-AS2Q96M78 137 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 TBCDQ9BTW9 1192 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 NTMT1Q9BV86 223 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 RHBGQ9H310 441 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 MKS1Q9NXB0 559 aa10.2□□□□□ -0.78
TPM1-229ENST00000561242 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PMS2P1A4D2B8 440 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 E2F3O00716 465 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 FFAR3O14843 346 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 BIRC5O15392 142 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 GPR42O15529 346 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 TLX3O43711 291 aaPredicted RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 LCMT2O60294 686 aaKnown RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 CREG1O75629 220 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 KLHL18O94889 574 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 NSA2O95478 260 aaKnown RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 DLGAP3O95886 979 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 STATHP02808 62 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ZNF888P0CJ79 500 aaPredicted RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 PRKAR1AP10644 381 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 MTHFD2P13995 350 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 IL1RNP18510 177 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 GRK2P25098 689 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 OR1D4P47884 311 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 EMP2P54851 167 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 MTTPP55157 894 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 RAB8AP61006 207 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 STX3Q13277 289 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 CLN3Q13286 438 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 DSG2Q14126 1118 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 NCF4Q15080 339 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 TGIF1Q15583 401 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 HKDC1Q2TB90 917 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PRAMEF17Q5VTA0 474 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 FRG2Q64ET8 278 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 FAM199XQ6PEV8 388 aaPredicted RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 GPR155Q7Z3F1 870 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 VASH2Q86V25 355 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 C10orf107Q8IVU9 208 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 PRSS58Q8IYP2 241 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ARFGAP2Q8N6H7 521 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ENDOVQ8N8Q3 282 aaKnown RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 GBP7Q8N8V2 638 aaPredicted RBP10.19□□□□□ -0.78
TPM1-229ENST00000561242 OR7G3Q8NG95 312 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 OR4F6Q8NGB9 312 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 STARD8Q92502 1023 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 GAL3ST3Q96A11 431 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 ZBTB9Q96C00 473 aa10.19□□□□□ -0.78
TPM1-229ENST00000561242 FRG2BQ96QU4 278 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms