RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	CDKN2D	P55273	166 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	CCZ1B	P86790	482 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	CCZ1	P86791	482 aa	Predicted RBP	12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	RBPJ	Q06330	500 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	PWP1	Q13610	501 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	HERC3	Q15034	1050 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	PHKG1	Q16816	387 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	SFT2D3	Q587I9	215 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	MFSD4B	Q5TF39	518 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	DUPD1	Q68J44	220 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	FCRLB	Q6BAA4	426 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	SPINK14	Q6IE38	97 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	BNC2	Q6ZN30	1099 aa	Predicted RBP	12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	MBOAT1	Q6ZNC8	495 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	STRA8	Q7Z7C7	330 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	GALNT7	Q86SF2	657 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	CNTN4	Q8IWV2	1026 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	PALM2	Q8IXS6	379 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	PPIL6	Q8IXY8	311 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	LGI4	Q8N135	537 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	OR56A3	Q8NH54	315 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	ELP5	Q8TE02	316 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	SNF8	Q96H20	258 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	UTP23	Q9BRU9	249 aa	Known RBP	12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	HAUS8	Q9BT25	410 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	CLK4	Q9HAZ1	481 aa	Known RBP	12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	PPP2R2C	Q9Y2T4	447 aa		12.84	□□□□□ -0.35
RNF31-223	ENST00000560754	CSMD2	Q7Z408	3487 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	MAN1A2	O60476	641 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	GALR3	O60755	368 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	RDH16	O75452	317 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	NEURL1	O76050	574 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	TTC4	O95801	387 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	SP1	P08047	785 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	SLC35G6	P0C7Q6	338 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	CDH1	P12830	882 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	PGAM1	P18669	254 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	HIST1H2AD	P20671	130 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	HTR1E	P28566	365 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	CCR8	P51685	355 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	PMP22	Q01453	160 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	ACTN3	Q08043	901 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	DHX9	Q08211	1270 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	USP10	Q14694	798 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	CRYM	Q14894	314 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	ABRAXAS2	Q15018	415 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	PAPD4	Q6PIY7	484 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	KIAA0408	Q6ZU52	694 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	SPPL2C	Q8IUH8	684 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	ARMC10	Q8N2F6	343 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	ZNF740	Q8NDX6	193 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	OR5T3	Q8NGG3	340 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	MOCOS	Q96EN8	888 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	PEX11G	Q96HA9	241 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	PDLIM5	Q96HC4	596 aa	Known RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	HIST1H2AH	Q96KK5	128 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	GPR137	Q96N19	417 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	OR4K3	Q96R72	315 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	NAP1L3	Q99457	506 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	NDN	Q99608	321 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	LPAR4	Q99677	370 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	HIST1H2AJ	Q99878	128 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	H2AFJ	Q9BTM1	129 aa		12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.83	□□□□□ -0.36
RNF31-223	ENST00000560754	TRBC2	A0A5B9	178 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	CHST10	O43529	356 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	ASNA1	O43681	348 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SMIM10L1	P0DMW3	83 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	CD46	P15529	392 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	ALOX12	P18054	663 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	POU3F2	P20265	443 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	EEF1D	P29692	281 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	PTGER4	P35408	488 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	AHR	P35869	848 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	AP1S2	P56377	157 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SLC26A5	P58743	744 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	IL2	P60568	153 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	ADORA2A-AS1	P86434	159 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	MEF2A	Q02078	507 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	OR1C1	Q15619	314 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	C3AR1	Q16581	482 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	MSS51	Q4VC12	460 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	RBM20	Q5T481	1227 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SLC25A25	Q6KCM7	469 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	NIPAL1	Q6NVV3	410 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	RPS19BP1	Q86WX3	136 aa	Known RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SIAH3	Q8IW03	269 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	MYO1H	Q8N1T3	1032 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SLC5A8	Q8N695	610 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	HORMAD2	Q8N7B1	307 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	TMEM178A	Q8NBL3	297 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	ZCCHC10	Q8TBK6	192 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	NT5C	Q8TCD5	201 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	ACTRT1	Q8TDG2	376 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	TBC1D20	Q96BZ9	403 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	SMIM10	Q96HG1	83 aa		12.82	□□□□□ -0.36
RNF31-223	ENST00000560754	NAT9	Q9BTE0	207 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms