RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TLCD2A6NGC4 264 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 KHNYNO15037 678 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ANGPT2O15123 496 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 CFLARO15519 480 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 NDUFS4O43181 175 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 MAP3K7O43318 606 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 DUX1O43812 170 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 NRP2O60462 931 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 KRT34O76011 436 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ANXA4P09525 319 aaPredicted RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SLC35G6P0C7Q6 338 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 TYRP1P17643 537 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SDC1P18827 310 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PRPS1L1P21108 318 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 CDH3P22223 829 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RPL3P39023 403 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 MPLP40238 635 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 BCL6P41182 706 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RAP1GDS1P52306 607 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 STXBP1P61764 594 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 UFM1P61960 85 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RAE1P78406 368 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 MXRA7P84157 204 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RGS1Q08116 209 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 TGM3Q08188 693 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ZNF763Q0D2J5 394 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SQSTM1Q13501 440 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SUZ12Q15022 739 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ZIC1Q15915 447 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 MMEL1Q495T6 779 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 DNAL1Q4LDG9 190 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ZC3H12BQ5HYM0 836 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ADNP2Q6IQ32 1131 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PAOXQ6QHF9 649 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 C16orf89Q6UX73 402 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 GK5Q6ZS86 529 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RNF44Q7L0R7 432 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 NUDT13Q86X67 352 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ZNF761Q86XN6 746 aaPredicted RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PLXDC1Q8IUK5 500 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 POU5F2Q8N7G0 328 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 CAMKVQ8NCB2 501 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 OR9I1Q8NGQ6 314 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 NT5CQ8TCD5 201 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 TESCQ96BS2 214 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ROPN1LQ96C74 230 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 TM4SF19Q96DZ7 209 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 MTERF3Q96E29 417 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 SPDL1Q96EA4 605 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 AHCYL2Q96HN2 611 aaKnown RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 APOLD1Q96LR9 279 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 RAB3IPQ96QF0 476 aaPredicted RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ARRDC1-AS1Q9H2J1 176 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 OR51B5Q9H339 312 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 ACTL8Q9H568 366 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 CLMPQ9H6B4 373 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 C11orf16Q9NQ32 467 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 EVA1BQ9NVM1 165 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 TAS2R1Q9NYW7 299 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 LEF1Q9UJU2 399 aaPredicted RBP8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PILRAQ9UKJ1 303 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 DLGAP4Q9Y2H0 992 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 PCDHGB2Q9Y5G2 931 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 IGHV1OR21-1A0A087WYE8 117 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 GNG14A0A1W2PPG7 69 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 CCDC154A6NI56 674 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PLPP1O14494 284 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TXNDC9O14530 226 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 GSC2O15499 205 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PCDH7O60245 1069 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 SRPX2O60687 465 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 EEDO75530 441 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TBX6O95947 436 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DDX5P17844 614 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ALDH4A1P30038 563 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 BSGP35613 385 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 CPOXP36551 454 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ZFP36L2P47974 494 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 DUSP3P51452 185 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ATXN3P54252 364 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 NME5P56597 212 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TRA2BP62995 288 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 SRSF11Q05519 484 aaKnown RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 LRRC74AQ0VAA2 488 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 HYAL2Q12891 473 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 ART3Q13508 389 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 PTGR1Q14914 329 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 NR0B2Q15466 257 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 INAVAQ3KP66 663 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 OR4C11Q6IEV9 310 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 IRGCQ6NXR0 463 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 FBXO42Q6P3S6 717 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 TRIM40Q6P9F5 258 aa8.22□□□□□ -1.09
TRAF3-209ENST00000560463 WDR74Q6RFH5 385 aaPredicted RBP8.22□□□□□ -1.09
TRAF3-209ENST00000560463 RINLQ6ZS11 566 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms