RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 ATG9BQ674R7 924 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 RIPOR1Q6ZS17 1223 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 PAQR7Q86WK9 346 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 KBTBD2Q8IY47 623 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 FBXO15Q8NCQ5 510 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 TSNARE1Q96NA8 513 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 FAM167BQ9BTA0 163 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 ZNF160Q9HCG1 818 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 C20orf96Q9NUD7 363 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 RIC8BQ9NVN3 520 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 KLHL42Q9P2K6 505 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 SVILO95425 2214 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 CRYBG3Q68DQ2 2970 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 LOC105369274A0A096LPK9 316 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 LOC102723532A0A0G2JNH3 316 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 A0A1W2PPM1 405 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 DYTNA2CJ06 578 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 H0YGG7 62 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 MED26O95402 600 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CYC1P08574 325 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ANXA5P08758 320 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 COX6A1P12074 109 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ENO3P13929 434 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CREB1P16220 341 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CHRM3P20309 590 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 DRD4P21917 467 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CXCR2P25025 360 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 SOX11P35716 441 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 SERPINB8P50452 374 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 PNLIPRP1P54315 467 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ARF3P61204 181 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 Q0VFX4 171 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 THOC5Q13769 683 aaKnown RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 PDK4Q16654 411 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF425Q6IV72 752 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 TRMT10BQ6PF06 316 aaKnown RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 NDUFAF7Q7L592 441 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 OR4N4Q8N0Y3 316 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 CSNK1A1LQ8N752 337 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 MZB1Q8WU39 189 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 SREK1Q8WXA9 508 aaKnown RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 RERGQ96A58 199 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF317Q96PQ6 595 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 ACAT2Q9BWD1 397 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 TGIF2Q9GZN2 237 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 VPS11Q9H270 941 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 MKKSQ9NPJ1 570 aaPredicted RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
SMAD3-214ENST00000560402 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
SMAD3-214ENST00000560402 TRAV17A0A0B4J275 112 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 KRT87PA6NCN2 255 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 CXorf49A8MYA2 514 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-214ENST00000560402 IDSB3KWA1 339 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 NRP2O60462 931 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 GLRA3O75311 464 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 BMP10O95393 424 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 C1QAP02745 245 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 SERPINA7P05543 415 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 PRR35P0CG20 571 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 MPC1LP0DKB6 136 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 PYGBP11216 843 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 EMP2P54851 167 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 ARG2P78540 354 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 PRDX1Q06830 199 aaKnown RBP12.88□□□□□ -0.35
SMAD3-214ENST00000560402 NDUFA9Q16795 377 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 ACSBG2Q5FVE4 666 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 ICE2Q659A1 982 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 ZNF787Q6DD87 383 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 SUSD1Q6UWL2 747 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC91Q7Z6B0 441 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 LMNTD2Q8IXW0 634 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 LRRC34Q8IZ02 419 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 TCP10LQ8TDR4 215 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 KCNJ9Q92806 393 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 DRC3Q9H069 523 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC68Q9H2F9 335 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 OLAHQ9NV23 265 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 DCDC2Q9UHG0 476 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 TSR3Q9UJK0 312 aaKnown RBP12.88□□□□□ -0.35
SMAD3-214ENST00000560402 MID2Q9UJV3 735 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 GRID1Q9ULK0 1009 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 CRYL1Q9Y2S2 319 aa12.88□□□□□ -0.35
SMAD3-214ENST00000560402 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
SMAD3-214ENST00000560402 CELSR2Q9HCU4 2923 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms