RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SAMD4BQ5PRF9 694 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 TCHHL1Q5QJ38 904 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 GPRC6AQ5T6X5 926 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 INTS11Q5TA45 600 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 METRNLQ641Q3 311 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ITPRIPL1Q6GPH6 555 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 KRT80Q6KB66 452 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 CASC4Q6P4E1 433 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 LINC00299Q6ZSB3 139 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PATL1Q86TB9 770 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 SNX32Q86XE0 403 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PPP1R3BQ86XI6 285 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRAPPC5Q8IUR0 188 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TMEM151BQ8IW70 566 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRIM48Q8IWZ4 208 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 D2HGDHQ8N465 521 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 LILRA3Q8N6C8 439 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 METTL25Q8N6Q8 603 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRIML2Q8N7C3 387 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ANKFN1Q8N957 763 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TMEM102Q8N9M5 508 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 Q8NA96 180 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 SMYD1Q8NB12 490 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PDPRQ8NCN5 879 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 BHLHE22Q8NFJ8 381 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 GABPB2Q8TAK5 448 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 BORCS5Q969J3 196 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 EME1Q96AY2 570 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ROPN1LQ96C74 230 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF501Q96CX3 271 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CXorf40BQ96DE9 158 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 RMND5BQ96G75 393 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 ZDHHC12Q96GR4 267 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 MAELQ96JY0 434 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF514Q96K75 400 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CNBD2Q96M20 576 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 FCRL4Q96PJ5 515 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PRPF18Q99633 342 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CCT7Q99832 543 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TUBA1CQ9BQE3 449 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 MCMBPQ9BTE3 642 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRMOQ9BU70 441 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 GRIP2Q9C0E4 1043 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TWSG1Q9GZX9 223 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 C10orf88Q9H8K7 445 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF395Q9H8N7 513 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 NMRAL1Q9HBL8 299 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TBC1D23Q9NUY8 699 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PNPOQ9NVS9 261 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ARMC1Q9NVT9 282 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 BFARQ9NZS9 450 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TMEM216Q9P0N5 145 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 KCND3Q9UK17 655 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRHDEQ9UKU6 1024 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PAIP2BQ9ULR5 123 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 FAF1Q9UNN5 650 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 B3GNT3Q9Y2A9 372 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PCDHB3Q9Y5E6 796 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 CFAP20Q9Y6A4 193 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CELSR2Q9HCU4 2923 aa5.65□□□□□ -1.51
USP3-212ENST00000559276 CRYBG3Q68DQ2 2970 aa5.65□□□□□ -1.51
USP3-212ENST00000559276 LOC100653049A0A140TA62 436 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 TCRBV3S1A0A5B6 114 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 HEATR9A2RTY3 570 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 TLCD2A6NGC4 264 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 TRIM64BA6NI03 449 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 AQP12BA6NM10 295 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 AGAP14A8MT82 685 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 F5H423 210 aaPredicted RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 G3V2L1 256 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 AIM2O14862 343 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 TPD52L2O43399 206 aaKnown RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 HCRTR1O43613 425 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 KLHL41O60662 606 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 KCNJ13O60928 360 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 KRT34O76011 436 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 OR6B1O95007 311 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 AP2A1O95782 977 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 EPOP01588 193 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 CCNYL3P0C7X3 344 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 MTHFD1P11586 935 aaKnown RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 PORP16435 677 aaPredicted RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 RORAP35398 523 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 SPAM1P38567 509 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 ARCN1P48444 511 aaKnown RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 ITGA1P56199 1179 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 HSD11B2P80365 405 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 MRPS22P82650 360 aaKnown RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 ABRQ12979 859 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 BNIP2Q12982 314 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 MPP3Q13368 585 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 OLIG2Q13516 323 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 SEPT6Q14141 434 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 SQLEQ14534 574 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 ZNF829Q3KNS6 432 aaPredicted RBP5.64□□□□□ -1.51
USP3-212ENST00000559276 COQ5Q5HYK3 327 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 PLEKHS1Q5SXH7 462 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 FAM45BPQ6NSW5 357 aa5.64□□□□□ -1.51
USP3-212ENST00000559276 PPP4R4Q6NUP7 873 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms