RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NAA25Q14CX7 972 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ZRSR2Q15696 482 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 RBBP7Q16576 425 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CPSF6Q16630 551 aaKnown RBP eCLIP10.36□□□□□ -0.75
TPM1-217ENST00000559108 LIPMQ5VYY2 423 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 METTL2BQ6P1Q9 378 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 TLDC1Q6P9B6 456 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 TTLL10Q6ZVT0 673 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CROCCP2Q86T23 111 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 SLC22A9Q8IVM8 553 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CNPY4Q8N129 248 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 AFAP1L2Q8N4X5 818 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 OR5T3Q8NGG3 340 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 OR9A4Q8NGU2 314 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 MGARPQ8TDB4 240 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 UTP15Q8TED0 518 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 SLC13A3Q8WWT9 602 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 FGF11Q92914 225 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CRELD1Q96HD1 420 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 SMIM10Q96HG1 83 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ZNF382Q96SR6 550 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 EFCAB11Q9BUY7 163 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 SORBS1Q9BX66 1292 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 MS4A8Q9BY19 250 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ZNF717Q9BY31 904 aaPredicted RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 CHST8Q9H2A9 424 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 FANCEQ9HB96 536 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 KCNK9Q9NPC2 374 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 IRAK4Q9NWZ3 460 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 IL17BQ9UHF5 180 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 SERTAD3Q9UJW9 196 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 TIMM22Q9Y584 194 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ANGPTL3Q9Y5C1 460 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 PTGDR2Q9Y5Y4 395 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 MRPS18BQ9Y676 258 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 MAU2Q9Y6X3 613 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 A0A0A6YYC8 382 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 MAGEB17A8MXT2 336 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 H0YIV9 168 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 STMND1H3BQB6 276 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 I3L1I5 382 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 RTCAO00442 366 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 DSCR3O14972 297 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 TRIM13O60858 407 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CLDN9O95484 217 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 SERPIND1P05546 499 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 ZNF888P0CJ79 500 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 LIPCP11150 499 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 PCNAP12004 261 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 LIFP15018 202 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 BGNP21810 368 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 SERPINB3P29508 390 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CCNG1P51959 295 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 RAB8AP61006 207 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 RPS13P62277 151 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 LCP2Q13094 533 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 DDX39BQ13838 428 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 GRM7Q14831 915 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 GGTA1PQ4G0N0 100 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 TOR1AIP1Q5JTV8 583 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 TCTE1Q5JU00 501 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 TMEM164Q5U3C3 297 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 MED27Q6P2C8 311 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 C6orf15Q6UXA7 325 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 BPHLQ86WA6 291 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 MYLK4Q86YV6 388 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 GPR135Q8IZ08 494 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 NLGN4XQ8N0W4 816 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CDYL2Q8N8U2 506 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 KDF1Q8NAX2 398 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 NLGN4YQ8NFZ3 816 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 HUS1BQ8NHY5 278 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 N4BP2L2Q92802 583 aaPredicted RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 MS4A6EQ96DS6 147 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CLIP3Q96DZ5 547 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 QRFPRQ96P65 431 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 F2RL3Q96RI0 385 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 MTERF1Q99551 399 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 ZPBPQ9BS86 351 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CAPS2Q9BXY5 557 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 IQCGQ9H095 443 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 MID1IP1Q9NPA3 183 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 DMRT3Q9NQL9 472 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 CTSFQ9UBX1 484 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 TRPS1Q9UHF7 1281 aa10.35□□□□□ -0.75
TPM1-217ENST00000559108 URB1O60287 2271 aaKnown RBP10.35□□□□□ -0.75
TPM1-217ENST00000559108 TPRP12270 2363 aaKnown RBP10.34□□□□□ -0.75
TPM1-217ENST00000559108 ANKRD11Q6UB99 2663 aaPredicted RBP10.34□□□□□ -0.75
TPM1-217ENST00000559108 A0A1B0GX78 115 aa10.34□□□□□ -0.75
TPM1-217ENST00000559108 OR2W5A6NFC9 320 aa10.34□□□□□ -0.75
TPM1-217ENST00000559108 SGK494L7N484 410 aa10.34□□□□□ -0.75
TPM1-217ENST00000559108 SAP18O00422 153 aaKnown RBP10.34□□□□□ -0.75
TPM1-217ENST00000559108 TM9SF1O15321 606 aa10.34□□□□□ -0.75
TPM1-217ENST00000559108 UGDHO60701 494 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms