RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 NDC80O14777 642 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 EIF3HO15372 352 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 B4GALT2O60909 372 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 WFS1O76024 890 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 IPO13O94829 963 aaKnown RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 NSA2O95478 260 aaKnown RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 ENO2P09104 434 aaPredicted RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 SLC35G6P0C7Q6 338 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 PRR35P0CG20 571 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 C8orf89P0DMQ9 161 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 ITGAMP11215 1152 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 SOX8P57073 446 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 POU4F1Q01851 419 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 SLMAPQ14BN4 828 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 PCOLCEQ15113 449 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 NR6A1Q15406 480 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 OR4D1Q15615 310 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 TOR1AIP1Q5JTV8 583 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 FCRLBQ6BAA4 426 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 NXPE4Q6UWF7 544 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 ISLR2Q6UXK2 745 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 ANKRD53Q8N9V6 530 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 OR4K1Q8NGD4 311 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 PRR7Q8TB68 274 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 METTL21AQ8WXB1 218 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 CCT6BQ92526 530 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 TSLPQ969D9 159 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 VPS50Q96JG6 964 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 CYTH2Q99418 400 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 RBBP8Q99708 897 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 RAB17Q9H0T7 212 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 PRM3Q9NNZ6 103 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 C14orf105Q9NVL8 296 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 NSMCE4AQ9NXX6 385 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 NOVA2Q9UNW9 492 aaKnown RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 OARD1Q9Y530 152 aa11.83□□□□□ -0.52
SMAD3-208ENST00000558827 COPG1Q9Y678 874 aaKnown RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 SPTAN1Q13813 2472 aaKnown RBP11.83□□□□□ -0.52
SMAD3-208ENST00000558827 BLACEA4D250 179 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 FAM227AF5H4B4 570 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 H0YIG0 161 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 TAPBPO15533 448 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 CHST10O43529 356 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 C1QAP02745 245 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 CD1DP15813 335 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 STMN1P16949 149 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 GP5P40197 560 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 SCTRP47872 440 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 KCNC1P48547 511 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 HSPA7P48741 367 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 REEP5Q00765 189 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 GUCY2DQ02846 1103 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 DLG1Q12959 904 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 CDC16Q13042 620 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 BMPR2Q13873 1038 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 UAP1Q16222 522 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-208ENST00000558827 HIST2H2BCQ6DN03 193 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 C8orf74Q6P047 294 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 IGFL3Q6UXB1 125 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 Q6ZS92 163 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 RAPH1Q70E73 1250 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 GPSM1Q86YR5 675 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 IQCKQ8N0W5 287 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 CYP4X1Q8N118 509 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 OR1N1Q8NGS0 311 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 PSMF1Q92530 271 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 TM9SF4Q92544 642 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 NACC2Q96BF6 587 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 RHBDF1Q96CC6 855 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 GPR22Q99680 433 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 CPNE1Q99829 537 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 WDR77Q9BQA1 342 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-208ENST00000558827 AIF1LQ9BQI0 150 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 TGIF2Q9GZN2 237 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 AICDAQ9GZX7 198 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 WWOXQ9NZC7 414 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 KCNE2Q9Y6J6 123 aa11.82□□□□□ -0.52
SMAD3-208ENST00000558827 SPTBN1Q01082 2364 aaKnown RBP11.82□□□□□ -0.52
SMAD3-208ENST00000558827 HIVEP3Q5T1R4 2406 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 A8MUA0 341 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 C4orf51C9J302 202 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 CLGNO14967 610 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 SEMA7AO75326 666 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 SH3BGRLO75368 114 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 AGFG2O95081 481 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 WISP3O95389 354 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 SERPINA7P05543 415 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ALOX12P18054 663 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ARG2P78540 354 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 BTG2P78543 158 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 RGS1Q08116 209 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 SLBPQ14493 270 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMAD3-208ENST00000558827 TGFBIQ15582 683 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 ADNP2Q6IQ32 1131 aa11.81□□□□□ -0.52
SMAD3-208ENST00000558827 TMEM205Q6UW68 189 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms