RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 RASAL1O95294 804 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 STSP08842 583 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 PGGT1BP53609 377 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 ITGA8P53708 1063 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 PWP1Q13610 501 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 FRG1Q14331 258 aaKnown RBP13.36□□□□□ -0.27
SNX6-210ENST00000557341 ABRAXAS2Q15018 415 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 ZXDCQ2QGD7 858 aaPredicted RBP13.36□□□□□ -0.27
SNX6-210ENST00000557341 STRA8Q7Z7C7 330 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 SHISA5Q8N114 240 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 AFAP1L2Q8N4X5 818 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 SLC5A11Q8WWX8 675 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 PDLIM5Q96HC4 596 aaKnown RBP13.36□□□□□ -0.27
SNX6-210ENST00000557341 TRIM51Q9BSJ1 452 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 ABI3Q9P2A4 366 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 MYO9AB2RTY4 2548 aa13.36□□□□□ -0.27
SNX6-210ENST00000557341 A0A1B0GUH1 482 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 USP27XA6NNY8 438 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 A8MUI8 341 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 CCDC188H7C350 402 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 TTI1O43156 1089 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 PRAMEF2O60811 474 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
SNX6-210ENST00000557341 SERPIND1P05546 499 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 ALOX12P18054 663 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 JAK1P23458 1154 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 COL8A1P27658 744 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 DCTP40126 519 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 RHAGQ02094 409 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 RGS1Q08116 209 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 MGAT5Q09328 741 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 CSHL1Q14406 222 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 NSDHLQ15738 373 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 PPP1R3AQ16821 1122 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 CATSPEREQ5SY80 951 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 ZNF787Q6DD87 383 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
SNX6-210ENST00000557341 ABHD13Q7L211 337 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 CREG2Q8IUH2 290 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 OR5T3Q8NGG3 340 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 M1APQ8TC57 530 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 NT5CQ8TCD5 201 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 MOCOSQ96EN8 888 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 LPAR4Q99677 370 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 KCNK13Q9HB14 408 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 STMN3Q9NZ72 180 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 DYRK1BQ9Y463 629 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
SNX6-210ENST00000557341 FAM95CA0A1B0GW59 222 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 MAGEB17A8MXT2 336 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 NDC80O14777 642 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 GALR3O60755 368 aaPredicted RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 FHP07954 510 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 SAT1P21673 171 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 AHRP35869 848 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 SCTRP47872 440 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 KCNK10P57789 538 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 GNG11P61952 73 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 REEP5Q00765 189 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 PDIA2Q13087 525 aaKnown RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 MEP1AQ16819 746 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 ACER2Q5QJU3 275 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 FCRLBQ6BAA4 426 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 H3F3CQ6NXT2 135 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 GFRALQ6UXV0 394 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 FRA10AC1Q70Z53 315 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 TMPRSS11BQ86T26 416 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 FJX1Q86VR8 437 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 ZC3HC1Q86WB0 502 aaKnown RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 BEST3Q8N1M1 668 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 NKAPQ8N5F7 415 aaKnown RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 AMER2Q8N7J2 671 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 FBXO36Q8NEA4 188 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 PLPP5Q8NEB5 264 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 DNAJB8Q8NHS0 232 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 ANKRD7Q92527 254 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 TBC1D20Q96BZ9 403 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 NAPGQ99747 312 aaPredicted RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 AIF1LQ9BQI0 150 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 TRIM31Q9BZY9 425 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 SPNS1Q9H2V7 528 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 PELI2Q9HAT8 420 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 MMP25Q9NPA2 562 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 LANCL2Q9NS86 450 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 IKZF3Q9UKT9 509 aa13.34□□□□□ -0.27
SNX6-210ENST00000557341 NCOA6Q14686 2063 aaPredicted RBP13.34□□□□□ -0.27
SNX6-210ENST00000557341 GTF3C1Q12789 2109 aa13.33□□□□□ -0.28
SNX6-210ENST00000557341 NPEPPSL1A6NEC2 478 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms