RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PCGF5Q86SE9 256 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 LDB1Q86U70 411 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 PRSS58Q8IYP2 241 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 RNF10Q8N5U6 811 aaKnown RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 SIRT6Q8N6T7 355 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 AMER3Q8N944 861 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 RNF214Q8ND24 703 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 GIMAP7Q8NHV1 300 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 THAP3Q8WTV1 239 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 RERGQ96A58 199 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 MMABQ96EY8 250 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 CCDC120Q96HB5 630 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 ZNF354BQ96LW1 612 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 BIRC8Q96P09 236 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 OR2A5Q96R48 311 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 KIFC1Q9BW19 673 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 DRC3Q9H069 523 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 PLA2G3Q9NZ20 509 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 STMN3Q9NZ72 180 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 BFARQ9NZS9 450 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 MARCH4Q9P2E8 410 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 C19orf25Q9UFG5 118 aaPredicted RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 CIDEBQ9UHD4 219 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 ZNF148Q9UQR1 794 aa8.2□□□□□ -1.1
VRK1-206ENST00000557222 RUVBL1Q9Y265 456 aaKnown RBP8.2□□□□□ -1.1
VRK1-206ENST00000557222 NF1P21359 2839 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 SPG11Q96JI7 2443 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 KCNE1BA0A087WTH5 132 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 IGKV1-8A0A0C4DH67 115 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 CATP04040 527 aaKnown RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 UQCRHP07919 91 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 C8orf89P0DMQ9 161 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ITGAMP11215 1152 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 CAPN3P20807 821 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 IL10P22301 178 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 MST1P26927 711 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 SSTR2P30874 369 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 AGTR2P50052 363 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 PNLIPRP1P54315 467 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 EEF1A2Q05639 463 aaKnown RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 FASTKQ14296 549 aaKnown RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 CTSL3PQ5NE16 218 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 SEL1L2Q5TEA6 688 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ICE2Q659A1 982 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 PLAG1Q6DJT9 500 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 RAD9BQ6WBX8 426 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 Q6ZPB1 254 aaPredicted RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 KIAA1328Q86T90 577 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ZC3H7AQ8IWR0 971 aaKnown RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
VRK1-206ENST00000557222 CCDC89Q8N998 374 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 METTL21AQ8WXB1 218 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ATG4AQ8WYN0 398 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 LPGAT1Q92604 370 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 LURAP1Q96LR2 239 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 CYTH2Q99418 400 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 MESP1Q9BRJ9 268 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 FAM129AQ9BZQ8 928 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ZKSCAN5Q9Y2L8 839 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 ZNF835Q9Y2P0 537 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 CPAMD8Q8IZJ3 1885 aa8.19□□□□□ -1.1
VRK1-206ENST00000557222 NCOA6Q14686 2063 aaPredicted RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 GTF3C1Q12789 2109 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 CACNA1CQ13936 2221 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ASPDHA6ND91 283 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ARHGEF33A8MVX0 844 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 E7ENX8 843 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 TTI1O43156 1089 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 KIF5CO60282 957 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 NRP2O60462 931 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 SLC19A2O60779 497 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 NSA2O95478 260 aaKnown RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 FTCDO95954 541 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 CHRM3P20309 590 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 OGNP20774 298 aaKnown RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 ARNTP27540 789 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 FMO4P31512 558 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ADMP35318 185 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 EIF3BP55884 814 aaKnown RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 TAP2Q03519 686 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 PTK6Q13882 451 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 EXT1Q16394 746 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 CCNG2Q16589 344 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 HKDC1Q2TB90 917 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 TTLL9Q3SXZ7 439 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ZNF766Q5HY98 468 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ACER2Q5QJU3 275 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 CPEB2Q7Z5Q1 589 aaKnown RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 SLC13A5Q86YT5 568 aaPredicted RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 LGI4Q8N135 537 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ACRBPQ8NEB7 543 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 M1APQ8TC57 530 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 MCOLN3Q8TDD5 553 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 ACAT2Q9BWD1 397 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 TSGA10Q9BZW7 698 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 TMEM184CQ9NVA4 438 aa8.18□□□□□ -1.1
VRK1-206ENST00000557222 INTS10Q9NVR2 710 aaKnown RBP8.18□□□□□ -1.1
VRK1-206ENST00000557222 STOX2Q9P2F5 926 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms