RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 LANCL2Q9NS86 450 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 AMFRQ9UKV5 643 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 RNF6Q9Y252 685 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 REXO2Q9Y3B8 237 aaKnown RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 NAALAD2Q9Y3Q0 740 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 EPN1Q9Y6I3 576 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 FEZF1A0PJY2 475 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 FAM221AA4D161 298 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 BTNL10A8MVZ5 291 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 MAGEB17A8MXT2 336 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 MIF4GDA9UHW6 222 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 E5RI56 91 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 KIF5CO60282 957 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 PDE9AO76083 593 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 ZWINTO95229 277 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 IPO7O95373 1038 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 FTCDO95954 541 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 HOXD4P09016 255 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 ZSCAN5DPP0CG00 497 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 IMPA1P29218 277 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 COILP38432 576 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 MEOX1P50221 254 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 HLCSP50747 726 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CLCN7P51798 805 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 ADARP55265 1226 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 OR4D2P58180 307 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 MLF1P58340 268 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 RPS15AP62244 130 aaKnown RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 MYBPHQ13203 477 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 SNX1Q13596 522 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CUL1Q13616 776 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CMPK2Q5EBM0 449 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 RNF187Q5TA31 235 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CES4AQ5XG92 561 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 TMEM211Q6ICI0 200 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 TGIF2LYQ8IUE0 185 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 SULF2Q8IWU5 870 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CCDC89Q8N998 374 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 POGLUT1Q8NBL1 392 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CAMKVQ8NCB2 501 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 OR5T3Q8NGG3 340 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 GIMAP7Q8NHV1 300 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 C1orf54Q8WWF1 131 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 OR1F2PQ96R84 312 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 SLC30A3Q99726 388 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 FOXC2Q99958 501 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 IL22Q9GZX6 179 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 TRIM45Q9H8W5 580 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 CCM2LQ9NUG4 571 aaPredicted RBP8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 TMEM184CQ9NVA4 438 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 KCNN3Q9UGI6 736 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 SH2B3Q9UQQ2 575 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.06
HNRNPC-227ENST00000556897 FLNAP21333 2647 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 USP27XA6NNY8 438 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 KLRC4-KLRK1H3BQV0 150 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CDK2AP1O14519 115 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PFDN6O15212 129 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PRMT3O60678 531 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 DNAJB6O75190 326 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 FHP07954 510 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 F7P08709 466 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TFEBP19484 476 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 KLK2P20151 261 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 IL10P22301 178 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 HRH2P25021 359 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 MGAT1P26572 445 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TRHRP34981 398 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 RPL22P35268 128 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 SKIV2L2P42285 1042 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 NR0B1P51843 470 aaKnown RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 GPR85P60893 370 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TBPL1P62380 186 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PPP2R2AP63151 447 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 OLR1P78380 273 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 MPP1Q00013 466 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PMPCAQ10713 525 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 ARHGAP11AQ6P4F7 1023 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CENPUQ71F23 418 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 ASPGQ86U10 573 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 SLC26A11Q86WA9 606 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PRELID2Q8N945 189 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 FBXO15Q8NCQ5 510 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CHDHQ8NE62 594 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 ACRBPQ8NEB7 543 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 OR52N2Q8NGI0 321 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 SLC13A3Q8WWT9 602 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TBC1D20Q96BZ9 403 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TM4SF19Q96DZ7 209 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 THAP11Q96EK4 314 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 SEC16BQ96JE7 1060 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 PANX2Q96RD6 677 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TCF12Q99081 682 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 KIFC1Q9BW19 673 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CXXC4Q9H2H0 198 aa8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 TP63Q9H3D4 680 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 GSX1Q9H4S2 264 aaPredicted RBP8.45□□□□□ -1.06
HNRNPC-227ENST00000556897 CCDC177Q9NQR7 707 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms