RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 DRD4P21917 467 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 YY1P25490 414 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 RBL1P28749 1068 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PPIFP30405 207 aaKnown RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 CPOXP36551 454 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 VIPR2P41587 438 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 DIO1P49895 249 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CCR3P51677 355 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SLC18A1P54219 525 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 YWHAGP61981 247 aaKnown RBP eCLIP4.99□□□□□ -1.61
SRP54-211ENST00000556445 NIPAL4Q0D2K0 466 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SEMA3BQ13214 749 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CHIT1Q13231 466 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 NME3Q13232 169 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 NAB1Q13506 487 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 THOC5Q13769 683 aaKnown RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 CA9Q16790 459 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PARP6Q2NL67 630 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CLLU1OSQ5K130 101 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SYPL2Q5VXT5 272 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 NCBP2-AS2Q69YL0 99 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SFRP4Q6FHJ7 346 aaPredicted RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 CD300LGQ6UXG3 332 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 C3orf62Q6ZUJ4 267 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PTCHD4Q6ZW05 846 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CYS1Q717R9 158 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ZNF551Q7Z340 670 aaPredicted RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 ANKRD33Q7Z3H0 272 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ADCK2Q7Z695 626 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CCDC13Q8IYE1 715 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 LRRC43Q8N309 656 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CCDC185Q8N715 623 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ATP6V0D2Q8N8Y2 350 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CCNYQ8ND76 341 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 RBM15BQ8NDT2 890 aaKnown RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 DBF4BQ8NFT6 615 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 BCAS4Q8TDM0 211 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ABHD5Q8WTS1 349 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 HTR3CQ8WXA8 447 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 C9orf72Q96LT7 481 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SPATA13Q96N96 652 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 AGAP3Q96P47 875 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CASD1Q96PB1 797 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 OLFM3Q96PB7 478 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 INTS14Q96SY0 518 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 KCNK16Q96T55 309 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SELENOSQ9BQE4 189 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 RTP3Q9BQQ7 232 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 SRSF8Q9BRL6 282 aaKnown RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 PAAF1Q9BRP4 392 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PTDSS2Q9BVG9 487 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 HIPK3Q9H422 1215 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 DENND2DQ9H6A0 471 aaPredicted RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 CCDC134Q9H6E4 229 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 WDR6Q9NNW5 1121 aaKnown RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 TRPV5Q9NQA5 729 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 GLRX2Q9NS18 164 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PIGVQ9NUD9 493 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 ETNK2Q9NVF9 386 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 GPATCH2LQ9NWQ4 482 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 NKIRAS1Q9NYS0 192 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
SRP54-211ENST00000556445 SCML2Q9UQR0 700 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 OSGIN2Q9Y236 505 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 TNFRSF18Q9Y5U5 241 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 LIPGQ9Y5X9 500 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 CDY1Q9Y6F8 540 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 PATJQ8NI35 1801 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 TTC3P53804 2025 aa4.99□□□□□ -1.61
SRP54-211ENST00000556445 MAGEB16A2A368 324 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SMIM30A4D0T7 59 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SMIM23A6NLE4 172 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SLC33A1O00400 549 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 NEBLO76041 1014 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 SLCO2B1O94956 709 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 NXPH3O95157 252 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PAHP00439 452 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 APOEP02649 317 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 APRTP07741 180 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 EBLN1P0CF75 366 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 ZSCAN5DPP0CG00 497 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CCL5P13501 91 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 ETS1P14921 441 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CD9P21926 228 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 YWHAQP27348 245 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 EPHB2P29323 1055 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 LIPAP38571 399 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PITPNBP48739 271 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 DHPSP49366 369 aaPredicted RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 TUFMP49411 452 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 ALDH7A1P49419 539 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 SERPINB9P50453 376 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 CCT8P50990 548 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 TIRAPP58753 221 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 IL9RQ01113 521 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 PPIDQ08752 370 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 ILF2Q12905 390 aaKnown RBP4.98□□□□□ -1.61
SRP54-211ENST00000556445 FOXF2Q12947 444 aa4.98□□□□□ -1.61
SRP54-211ENST00000556445 GPR17Q13304 367 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms