RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 RPS3P23396 243 aaKnown RBP eCLIP13.04□□□□□ -0.322e-11■■□□□ 12.8
ACTN1-219ENST00000556432 ATP5DP30049 168 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 FMO4P31512 558 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 GRIA1P42261 906 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 KIR2DL3P43628 341 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
ACTN1-219ENST00000556432 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
ACTN1-219ENST00000556432 DLX5P56178 289 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 RPS15AP62244 130 aaKnown RBP13.04□□□□□ -0.32
ACTN1-219ENST00000556432 PLGLB1Q02325 96 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 TMEM214Q6NUQ4 689 aaKnown RBP13.04□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF585AQ6P3V2 769 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 CLEC9AQ6UXN8 241 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 PLPP5Q8NEB5 264 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 ELP5Q8TE02 316 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 DEFB126Q9BYW3 111 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 NAALAD2Q9Y3Q0 740 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 SCN3AQ9NY46 2000 aa13.04□□□□□ -0.32
ACTN1-219ENST00000556432 FIGNL2A6NMB9 653 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 FAM166BA8MTA8 275 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 KIF5CO60282 957 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 PSIP1O75475 530 aaKnown RBP13.03□□□□□ -0.32
ACTN1-219ENST00000556432 ACVR2AP27037 513 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-219ENST00000556432 MPP1Q00013 466 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 KLHL38Q2WGJ6 581 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 EMC4Q5J8M3 183 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 WDR53Q7Z5U6 358 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-219ENST00000556432 CAMKMTQ7Z624 323 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 CDC20BQ86Y33 519 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 MPP5Q8N3R9 675 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 CAMKVQ8NCB2 501 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 WFDC11Q8NEX6 87 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF480Q8WV37 535 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 C18orf12Q96KH6 178 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 OR1F2PQ96R84 312 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 PANX2Q96RD6 677 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 TRIM45Q9H8W5 580 aaPredicted RBP13.03□□□□□ -0.32
ACTN1-219ENST00000556432 RASSF1Q9NS23 344 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 LANCL2Q9NS86 450 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 PNPLA3Q9NST1 481 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
ACTN1-219ENST00000556432 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.32
ACTN1-219ENST00000556432 PHF3Q92576 2039 aaKnown RBP13.02□□□□□ -0.33
ACTN1-219ENST00000556432 SYCE3A1L190 88 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 E5RI56 91 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 E7ENX8 843 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ACOT7O00154 380 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 CBFA2T2O43439 604 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 B4GALT2O60909 372 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 FHP07954 510 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 INHBBP09529 407 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 IL10P22301 178 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 JAK1P23458 1154 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 UQCRC1P31930 480 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 PPIAP62937 165 aaKnown RBP13.02□□□□□ -0.33
ACTN1-219ENST00000556432 TAP2Q03519 686 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 GXYLT1Q4G148 440 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 B3GNT6Q6ZMB0 384 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ASPGQ86U10 573 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 PDSS2Q86YH6 399 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ZFP62Q8NB50 900 aaPredicted RBP13.02□□□□□ -0.33
ACTN1-219ENST00000556432 KCT2Q8NC54 265 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 C16orf52Q8NHV5 167 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 CREB3L4Q8TEY5 395 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 NUDT8Q8WV74 236 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 PEX13Q92968 403 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 CCDC138Q96M89 665 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 MDFIQ99750 246 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ATG10Q9H0Y0 220 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 TIMMDC1Q9NPL8 285 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 CHRAC1Q9NRG0 131 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 TMEM184CQ9NVA4 438 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 CRIM1Q9NZV1 1036 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
ACTN1-219ENST00000556432 TRBV11-1A0A0K0K1C0 115 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 FEZF1A0PJY2 475 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 A8MUA0 341 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 H3BMM5 538 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 PFDN6O15212 129 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SLC16A5O15375 505 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 IFNB1P01574 187 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 TUBB4AP04350 444 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SLC35G6P0C7Q6 338 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 FDFT1P37268 417 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 COILP38432 576 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms