RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 IL1RNP18510 177 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 GNLYP22749 145 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 JAK1P23458 1154 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 STX2P32856 288 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 SPRP35270 261 aaPredicted RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 XCR1P46094 333 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 PGGT1BP53609 377 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 PLTPP55058 493 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 MAT1AQ00266 395 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 MEF2AQ02078 507 aaPredicted RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 C2orf54Q08AI8 447 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 USP10Q14694 798 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 TGFBIQ15582 683 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 TSNQ15631 228 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 EXT1Q16394 746 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 SYT16Q17RD7 645 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 CATSPEREQ5SY80 951 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 FHL5Q5TD97 284 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 CEP128Q6ZU80 1094 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 PRSS41Q7RTY9 318 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 CPEB2Q7Z5Q1 589 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 PDSS2Q86YH6 399 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 CISD2Q8N5K1 135 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 ZNF740Q8NDX6 193 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 FBXO25Q8TCJ0 367 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 ANKRD49Q8WVL7 239 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 EGFL8Q99944 293 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 SLC6A16Q9GZN6 736 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 NT5DC2Q9H857 520 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 ASF1BQ9NVP2 202 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 TEKT2Q9UIF3 430 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 SLC22A14Q9Y267 594 aa11.18□□□□□ -0.62
VRK1-204ENST00000555351 MTO1Q9Y2Z2 717 aaKnown RBP11.18□□□□□ -0.62
VRK1-204ENST00000555351 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 SPENQ96T58 3664 aaKnown RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 MAGEB17A8MXT2 336 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 CXorf49A8MYA2 514 aaPredicted RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 SGK494L7N484 410 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 FFAR3O14843 346 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 GPR42O15529 346 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 H2AFYO75367 372 aaKnown RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 RDH16O75452 317 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 DDAH2O95865 285 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 CCDC166P0CW27 439 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 SMIM10L1P0DMW3 83 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 C1GALT1C1LP0DN25 315 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 MAGEA4P43358 317 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 UQCRFS1P47985 274 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 EFNA3P52797 238 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 GPX6P59796 221 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 RAB10P61026 200 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 SNRPNP63162 240 aaKnown RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 RHAGQ02094 409 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 ZNF460Q14592 562 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 MINDY4Q4G0A6 757 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 PRR30Q53SZ7 412 aaPredicted RBP11.17□□□□□ -0.62
VRK1-204ENST00000555351 SULT1C3Q6IMI6 304 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 H3F3CQ6NXT2 135 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 ANKRD53Q8N9V6 530 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 PDPRQ8NCN5 879 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 M1APQ8TC57 530 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 KIAA1191Q96A73 305 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 WDR34Q96EX3 536 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 SMIM10Q96HG1 83 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 PSMG3-AS1Q96PY0 264 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 MACROD1Q9BQ69 325 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 MESP1Q9BRJ9 268 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 LUZP4Q9P127 313 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 HCN3Q9P1Z3 774 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 LRRK2Q5S007 2527 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 PTPN13Q12923 2485 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 CPAMD8Q8IZJ3 1885 aa11.17□□□□□ -0.62
VRK1-204ENST00000555351 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 SYNDIG1LA6NDD5 238 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 JRKO75564 520 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 WDR47O94967 919 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 TUBB4AP04350 444 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 FHP07954 510 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 GP1BBP13224 206 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 CD1DP15813 335 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 CRABP2P29373 138 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 GLRBP48167 497 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 TNFSF10P50591 281 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 STXBP1P61764 594 aaKnown RBP11.16□□□□□ -0.62
VRK1-204ENST00000555351 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
VRK1-204ENST00000555351 PCDH1Q08174 1060 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 CDC16Q13042 620 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 WHAMMP3Q1A5X7 153 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 KBTBD12Q3ZCT8 623 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 FAAH2Q6GMR7 532 aa11.16□□□□□ -0.62
VRK1-204ENST00000555351 ZDHHC24Q6UX98 284 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms