RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 CYTH2Q99418 400 aa14.21□□□□□ -0.13
XRCC3-210ENST00000554974 NPAS2Q99743 824 aa14.21□□□□□ -0.13
XRCC3-210ENST00000554974 RBCK1Q9BYM8 510 aa14.21□□□□□ -0.13
XRCC3-210ENST00000554974 AKAP9Q99996 3911 aa14.21□□□□□ -0.13
XRCC3-210ENST00000554974 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 SGK494L7N484 410 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ZNHIT1O43257 154 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 BANF1O75531 89 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 TTC4O95801 387 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 HSD17B2P37059 387 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ELK3P41970 407 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ABATP80404 500 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 SLC7A5Q01650 507 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 TUBA3CQ13748 450 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 FRG1Q14331 258 aaKnown RBP14.2□□□□□ -0.14
XRCC3-210ENST00000554974 CRYMQ14894 314 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 NDUFA9Q16795 377 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 BBS9Q3SYG4 887 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 STEAP4Q687X5 459 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ZNF470Q6ECI4 717 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 TUBA3EQ6PEY2 450 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ANKRD37Q7Z713 158 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 CRLF3Q8IUI8 442 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 LRRC56Q8IYG6 542 aaPredicted RBP14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ZNF295-AS1Q8N0V1 137 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 OR51Q1Q8NH59 317 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 FBXO25Q8TCJ0 367 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 KCNK13Q9HB14 408 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ZDHHC18Q9NUE0 388 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 DMGDHQ9UI17 866 aaKnown RBP14.2□□□□□ -0.14
XRCC3-210ENST00000554974 ITGB1BP2Q9UKP3 347 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 SH2B3Q9UQQ2 575 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 MED16Q9Y2X0 877 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 MAD1L1Q9Y6D9 718 aa14.2□□□□□ -0.14
XRCC3-210ENST00000554974 SETD2Q9BYW2 2564 aaPredicted RBP14.2□□□□□ -0.14
XRCC3-210ENST00000554974 H0YIG0 161 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 EIF3HO15372 352 aaKnown RBP eCLIP14.19□□□□□ -0.146e-6■■■■□ 25.8
XRCC3-210ENST00000554974 RDH16O75452 317 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 CDC123O75794 336 aaPredicted RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 NSA2O95478 260 aaKnown RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 MYBL2P10244 700 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 ESRRAP11474 423 aaPredicted RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 IMPA1P29218 277 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 RIPPLY3P57055 190 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 TBPL1P62380 186 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 RELAQ04206 551 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 OR1C1Q15619 314 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 TTLL9Q3SXZ7 439 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 SPANXN3Q5MJ09 141 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 NEPROQ6NW34 567 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 ZNF549Q6P9A3 640 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 XKRXQ6PP77 449 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 PIWIL4Q7Z3Z4 852 aaKnown RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 DENND6AQ8IWF6 608 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 ASB11Q8WXH4 323 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 CCDC138Q96M89 665 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 GPR137Q96N19 417 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 FAM129AQ9BZQ8 928 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 FBXO6Q9NRD1 293 aaPredicted RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 C19orf25Q9UFG5 118 aaPredicted RBP14.19□□□□□ -0.14
XRCC3-210ENST00000554974 VPS9D1Q9Y2B5 631 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 NF1P21359 2839 aa14.19□□□□□ -0.14
XRCC3-210ENST00000554974 ESYT3A0FGR9 886 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 ZNF860A6NHJ4 632 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 NPIPA5E9PKD4 350 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 DEKP35659 375 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 CD96P40200 585 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 PLTPP55058 493 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 ALDH6A1Q02252 535 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 GUCY2DQ02846 1103 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 PDIA2Q13087 525 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 SPINK14Q6IE38 97 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 TMEM214Q6NUQ4 689 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 H3F3CQ6NXT2 135 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 PDSS2Q86YH6 399 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 LMNTD2Q8IXW0 634 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 CPNE9Q8IYJ1 553 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 KCT2Q8NC54 265 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 FBXO15Q8NCQ5 510 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 ADAMTS18Q8TE60 1221 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 ZNF354BQ96LW1 612 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 FRMD6Q96NE9 622 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 UTP23Q9BRU9 249 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 CCDC177Q9NQR7 707 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 INTS10Q9NVR2 710 aaKnown RBP14.18□□□□□ -0.14
XRCC3-210ENST00000554974 NPIPA1Q9UND3 350 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 CHMP2BQ9UQN3 213 aa14.18□□□□□ -0.14
XRCC3-210ENST00000554974 FEZF1A0PJY2 475 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 GABRR3A8MPY1 467 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 GFYI3L273 518 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 CYC1P08574 325 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 EEF1DP29692 281 aaKnown RBP14.17□□□□□ -0.14
XRCC3-210ENST00000554974 BCL6P41182 706 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 SKIV2L2P42285 1042 aaKnown RBP14.17□□□□□ -0.14
XRCC3-210ENST00000554974 SMSP52788 366 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 KRTAP10-9P60411 292 aa14.17□□□□□ -0.14
XRCC3-210ENST00000554974 RPS15AP62244 130 aaKnown RBP14.17□□□□□ -0.14
XRCC3-210ENST00000554974 HSF1Q00613 529 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms