RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 PAOXQ6QHF9 649 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FIGLAQ6QHK4 219 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 WDR74Q6RFH5 385 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 COMMD6Q7Z4G1 85 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 R3HCC1LQ7Z5L2 792 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 MYLK4Q86YV6 388 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 C10orf67Q8IYJ2 551 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ZNF740Q8NDX6 193 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 OR2L5Q8NG80 312 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 GOT1L1Q8NHS2 421 aaPredicted RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 LMX1AQ8TE12 382 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 RGMAQ96B86 450 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 APIPQ96GX9 242 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 TEX37Q96LM6 180 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 MTERF1Q99551 399 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 ZBTB18Q99592 522 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 MIR1-1HGQ9H1L0 117 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 MUC13Q9H3R2 512 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 TMEM74BQ9NUR3 256 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 FAM120CQ9NX05 1096 aaKnown RBP10.41□□□□□ -0.74
PABPN1-203ENST00000553960 CCDC167Q9P0B6 97 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 PLAGL1Q9UM63 463 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 INVSQ9Y283 1065 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 SLC22A7Q9Y694 548 aa10.41□□□□□ -0.74
PABPN1-203ENST00000553960 CROCCQ5TZA2 2017 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 A0A088AWK7 358 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 A0A1B0GVT2 93 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 ASPDHA6ND91 283 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 TLCD2A6NGC4 264 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 URADA6NGE7 173 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 CAPN5O15484 640 aaPredicted RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 MGRN1O60291 552 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 LCMT2O60294 686 aaKnown RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 GUCY1B2O75343 617 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 UBXN7O94888 489 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 KLHL18O94889 574 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 EPN2O95208 641 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 CER1O95813 267 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PGRP06401 933 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 SYPP08247 313 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 HSD17B1P14061 328 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PSMB5P28074 263 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 DHPSP49366 369 aaPredicted RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 STXBP1P61764 594 aaKnown RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 UFM1P61960 85 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 MLC1Q15049 377 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 TRMT5Q32P41 509 aaKnown RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 INAVAQ3KP66 663 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PIGGQ5H8A4 983 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PLA2G2CQ5R387 149 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 IRAK1BP1Q5VVH5 260 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 ABHD17CQ6PCB6 329 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 TSSK4Q6SA08 328 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 DLEU7Q6UYE1 221 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 RINLQ6ZS11 566 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 VN1R4Q7Z5H5 301 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 LIX1Q8N485 282 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 ARHGEF39Q8N4T4 335 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 C1orf52Q8N6N3 182 aaKnown RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 CAMKVQ8NCB2 501 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 OR8J3Q8NGG0 315 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PSMA8Q8TAA3 256 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 GTF2H4Q92759 462 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 GAL3ST3Q96A11 431 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 MS4A6EQ96DS6 147 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 TCTN2Q96GX1 697 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PPP1R36Q96LQ0 422 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 KCNC2Q96PR1 638 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PRPF18Q99633 342 aaKnown RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PRRX2Q99811 253 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 ZFYVE21Q9BQ24 234 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 DPY30Q9C005 99 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 BHLHE41Q9C0J9 482 aaPredicted RBP10.4□□□□□ -0.74
PABPN1-203ENST00000553960 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 XKR8Q9H6D3 395 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 LHX9Q9NQ69 397 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 HRASLS2Q9NWW9 162 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 CD300AQ9UGN4 299 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 BTNL2Q9UIR0 455 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 PCDHGA7Q9Y5G6 932 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 SNX11Q9Y5W9 270 aa10.4□□□□□ -0.74
PABPN1-203ENST00000553960 SDK1Q7Z5N4 2213 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 A0A0A6YYD5 115 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PRAMEF33A0A0G2JMD5 474 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 LOC100653049A0A140TA62 436 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 OR6C74A6NCV1 312 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 CCDC154A6NI56 674 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PRR33A8MZF0 331 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ISM1B1AKI9 464 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 RNASET2O00584 256 aaKnown RBP10.39□□□□□ -0.75
PABPN1-203ENST00000553960 PLPP1O14494 284 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ARHGAP33O14559 1287 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ANGPT2O15123 496 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 OR1F1O43749 312 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 KRT34O76011 436 aa10.39□□□□□ -0.75
PABPN1-203ENST00000553960 ANXA4P09525 319 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms