RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 RIPOR1Q6ZS17 1223 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 TRIM46Q7Z4K8 759 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 PIGWQ7Z7B1 504 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 CACNA2D3Q8IZS8 1091 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 CHCHD4Q8N4Q1 142 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
PRKCH-206ENST00000553830 GBP7Q8N8V2 638 aaPredicted RBP13.47□□□□□ -0.25
PRKCH-206ENST00000553830 FNDC5Q8NAU1 212 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 KCT2Q8NC54 265 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 TRPV3Q8NET8 790 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 CDC26Q8NHZ8 85 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 WDR48Q8TAF3 677 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 CREB3L4Q8TEY5 395 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 SEC16BQ96JE7 1060 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 PPP3R2Q96LZ3 170 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
PRKCH-206ENST00000553830 BRF2Q9HAW0 419 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 HEY2Q9UBP5 337 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 ADGRE2Q9UHX3 823 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 ARL2BPQ9Y2Y0 163 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
PRKCH-206ENST00000553830 EFCAB7A8K855 629 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 FOXE1O00358 373 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 LSM1O15116 133 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 ERI3O43414 337 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 VPS4BO75351 444 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 RSL1D1O76021 490 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 B3GALT4O96024 378 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 GBAP04062 536 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SLC35G6P0C7Q6 338 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 ZNF888P0CJ79 500 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 HSD3B1P14060 373 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 LBPP18428 481 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 NELFEP18615 380 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 PTX3P26022 381 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 HSD3B2P26439 372 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 LIMK1P53667 647 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 NME5P56597 212 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 RAB8AP61006 207 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 E2F1Q01094 437 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 ACSM2AQ08AH3 577 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 KHDRBS2Q5VWX1 349 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 ACSM2BQ68CK6 577 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CHSY3Q70JA7 882 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 KMT5CQ86Y97 462 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SLITRK4Q8IW52 837 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CAMKVQ8NCB2 501 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CEP70Q8NHQ1 597 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 ACTRT2Q8TDY3 377 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CCT7Q99832 543 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CENPKQ9BS16 269 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 NLNQ9BYT8 704 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 REXO4Q9GZR2 422 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 AICDAQ9GZX7 198 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 NMRK1Q9NWW6 199 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 C1orf109Q9NX04 203 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 RUVBL1Q9Y265 456 aaKnown RBP13.46□□□□□ -0.25
PRKCH-206ENST00000553830 CCL27Q9Y4X3 112 aa13.46□□□□□ -0.25
PRKCH-206ENST00000553830 C4orf51C9J302 202 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 HYAL3O43820 417 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 TBX6O95947 436 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 SERPINA6P08185 405 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 FTH1P19P0C7X4 201 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 NOVA1P51513 510 aaKnown RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 PDX1P52945 283 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 STXBP1P61764 594 aaKnown RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 TUBB3Q13509 450 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 CLPPQ16740 277 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 RFTN2Q52LD8 501 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 C6orf136Q5SQH8 315 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 IL23RQ5VWK5 629 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 LARP4Q71RC2 724 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 ARHGAP22Q7Z5H3 698 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 ZFAND4Q86XD8 727 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 CARFQ8N187 725 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 ZNF655Q8N720 491 aaPredicted RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 CLHC1Q8NHS4 586 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 NT5CQ8TCD5 201 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 SLC45A3Q96JT2 553 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 MAELQ96JY0 434 aaKnown RBP13.45□□□□□ -0.26
PRKCH-206ENST00000553830 C17orf62Q9BQA9 187 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 SARGQ9BW04 601 aa13.45□□□□□ -0.26
PRKCH-206ENST00000553830 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms