RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 FAM9CQ8IZT9 166 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 MINDY1Q8N5J2 469 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 WDR48Q8TAF3 677 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 NCSTNQ92542 709 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TCEAL3Q969E4 200 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 SLC45A3Q96JT2 553 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 OR2A5Q96R48 311 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 AICDAQ9GZX7 198 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ACTR5Q9H9F9 607 aaPredicted RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 C1GALT1Q9NS00 363 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 AHSPQ9NZD4 102 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 U3KQA8 63 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 NUP214P35658 2090 aaPredicted RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 A0A0J9YVX5 310 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 LRIT2A6NDA9 550 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SLC9B1P1A6NJY1 282 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 PLPP1O14494 284 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 NDUFS4O43181 175 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 JAK1P23458 1154 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TIA1P31483 386 aaKnown RBP eCLIP13.13□□□□□ -0.317e-13■■■□□ 18.3
APEX1-205ENST00000553555 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 PPM1FP49593 454 aaPredicted RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 CLDN8P56748 225 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 GPLD1P80108 840 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 STX5Q13190 355 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ADPRMQ3LIE5 342 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 RINLQ6ZS11 566 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 RNF44Q7L0R7 432 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ASRGL1Q7L266 308 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 COMMD6Q7Z4G1 85 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 VN1R4Q7Z5H5 301 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
APEX1-205ENST00000553555 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SLC13A3Q8WWT9 602 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 CCDC74AQ96AQ1 378 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 RGMAQ96B86 450 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ZDHHC12Q96GR4 267 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 FCRL4Q96PJ5 515 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 MAP3K3Q99759 626 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 EBPLQ9BY08 206 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 DPY30Q9C005 99 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 TAS2R1Q9NYW7 299 aa13.13□□□□□ -0.31
APEX1-205ENST00000553555 ASCC3Q8N3C0 2202 aaKnown RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 FAM234BA2RU67 622 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 EME2A4GXA9 379 aaPredicted RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 KIF1CO43896 1103 aaKnown RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 PCDH7O60245 1069 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 RETP07949 1114 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 ANXA4P09525 319 aaPredicted RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 ZNF883P0CG24 379 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 CD1CP29017 333 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 BSGP35613 385 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 GFERP55789 205 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 CFHR1Q03591 330 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 PWP1Q13610 501 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 TMEM35AQ53FP2 167 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 FAM92BQ6ZTR7 304 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 ASPGQ86U10 573 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 C19orf47Q8N9M1 422 aaKnown RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 GLB1L3Q8NCI6 653 aaPredicted RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 CLHC1Q8NHS4 586 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 FBXO27Q8NI29 283 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 NT5CQ8TCD5 201 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 TMEM74Q96NL1 305 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 TGM7Q96PF1 710 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 TSSK3Q96PN8 268 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 CD180Q99467 661 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 CENPKQ9BS16 269 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 REXO4Q9GZR2 422 aaKnown RBP13.12□□□□□ -0.31
APEX1-205ENST00000553555 MCM8Q9UJA3 840 aa13.12□□□□□ -0.31
APEX1-205ENST00000553555 CPED1A4D0V7 1026 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 TLCD2A6NGC4 264 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 C9JVG2 144 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 NR5A2O00482 541 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 FBP2O00757 339 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 DUX1O43812 170 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 KLHL18O94889 574 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 STATHP02808 62 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 KLK1P06870 262 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
APEX1-205ENST00000553555 KCNK10P57789 538 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
APEX1-205ENST00000553555 AMZ1Q400G9 498 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 TOR1AIP1Q5JTV8 583 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 FRMPD2BQ6IN97 320 aa13.11□□□□□ -0.31
APEX1-205ENST00000553555 GUSBP11Q6P575 273 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms