RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ENO2P09104 434 aaPredicted RBP17.2■□□□□ 0.34
SHMT2-206ENST00000553529 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 CD1DP15813 335 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 SCTRP47872 440 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 BMPR2Q13873 1038 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 CSHL1Q14406 222 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 USP10Q14694 798 aaKnown RBP17.2■□□□□ 0.34
SHMT2-206ENST00000553529 FAM219BQ5XKK7 198 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 IGFL2Q6UWQ7 119 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.2■□□□□ 0.34
SHMT2-206ENST00000553529 CAMKVQ8NCB2 501 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 BBOF1Q8ND07 529 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 DNAJB14Q8TBM8 379 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 FBF1Q8TES7 1133 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 MAGEB10Q96LZ2 347 aaPredicted RBP17.2■□□□□ 0.34
SHMT2-206ENST00000553529 GPR22Q99680 433 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 HAUS8Q9BT25 410 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 ANKHQ9HCJ1 492 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 LANCL2Q9NS86 450 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 C14orf105Q9NVL8 296 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 HECTD1Q9ULT8 2610 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 FLNCQ14315 2725 aa17.2■□□□□ 0.34
SHMT2-206ENST00000553529 TRBC2A0A5B9 178 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 H0YIG0 161 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 C8orf89P0DMQ9 161 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 CCND1P24385 295 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 HRH2P25021 359 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 SOX11P35716 441 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 MAGEA4P43358 317 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 SLC6A12P48065 614 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 HSPA7P48741 367 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 IRF9Q00978 393 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 RHAGQ02094 409 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 MFAP5Q13361 173 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 RBBP5Q15291 538 aaKnown RBP17.19■□□□□ 0.34
SHMT2-206ENST00000553529 NXPE4Q6UWF7 544 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 ZNF572Q7Z3I7 529 aaPredicted RBP17.19■□□□□ 0.34
SHMT2-206ENST00000553529 MAATS1Q7Z4T9 603 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 ANKRD37Q7Z713 158 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 KBTBD2Q8IY47 623 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 AFAP1L2Q8N4X5 818 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 FAM26EQ8N5C1 309 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 NKAPQ8N5F7 415 aaKnown RBP17.19■□□□□ 0.34
SHMT2-206ENST00000553529 NOA1Q8NC60 698 aaKnown RBP17.19■□□□□ 0.34
SHMT2-206ENST00000553529 GALNT11Q8NCW6 608 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 PRR7Q8TB68 274 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 UTP15Q8TED0 518 aaKnown RBP17.19■□□□□ 0.34
SHMT2-206ENST00000553529 IMMP1LQ96LU5 166 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 CYTH2Q99418 400 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 NPAS2Q99743 824 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 TRIM54Q9BYV2 358 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 ZNF700Q9H0M5 742 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 DYRK1BQ9Y463 629 aa17.19■□□□□ 0.34
SHMT2-206ENST00000553529 PABPN1LA6NDY0 278 aaKnown RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 TXNDC9O14530 226 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 PRPF4O43172 522 aaKnown RBP eCLIP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 CHST10O43529 356 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 GALR3O60755 368 aaPredicted RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 TBX6O95947 436 aaPredicted RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 EPORP19235 508 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 CD22P20273 847 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 BTG2P78543 158 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 SLMAPQ14BN4 828 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 TGFBIQ15582 683 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 ZKSCAN8Q15776 578 aaPredicted RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 TOR1AIP1Q5JTV8 583 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 ISLR2Q6UXK2 745 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 VN1R5Q7Z5H4 357 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 CREB3L4Q8TEY5 395 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 PPP4R1Q8TF05 950 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 NACC2Q96BF6 587 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 THAP11Q96EK4 314 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 CPNE1Q99829 537 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 RHBGQ9H310 441 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 ZDHHC18Q9NUE0 388 aa17.18■□□□□ 0.34
SHMT2-206ENST00000553529 UTP11Q9Y3A2 253 aaKnown RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 FLNBO75369 2602 aaKnown RBP17.18■□□□□ 0.34
SHMT2-206ENST00000553529 A0A1W2PQ72 361 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 HMX2A2RU54 273 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 E2F3O00716 465 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 EIF3HO15372 352 aaKnown RBP eCLIP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 B4GALT2O60909 372 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 URI1O94763 535 aaPredicted RBP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 CBX6O95503 412 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 SLC35G6P0C7Q6 338 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 CXCR2P25025 360 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 HNRNPH1P31943 449 aaKnown RBP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 GRK3P35626 688 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 GP5P40197 560 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 AGTR2P50052 363 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 POU4F1Q01851 419 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 GUCY2DQ02846 1103 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 SLBPQ14493 270 aaKnown RBP eCLIP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 SLCO4C1Q6ZQN7 724 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 CPEB2Q7Z5Q1 589 aaKnown RBP17.17■□□□□ 0.34
SHMT2-206ENST00000553529 KIF2BQ8N4N8 673 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 NT5CQ8TCD5 201 aa17.17■□□□□ 0.34
SHMT2-206ENST00000553529 GRHL3Q8TE85 626 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms