RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 INHBBP09529 407 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 CISD3P0C7P0 127 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF12P17014 697 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PCMT1P22061 227 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PRKACGP22612 351 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PIK3CBP42338 1070 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 IL5RAQ01344 420 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 FCHO2Q0JRZ9 810 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 RAPSNQ13702 412 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DDX39BQ13838 428 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DHCR24Q15392 516 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DUSP6Q16828 381 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PROX2Q3B8N5 592 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SLC44A4Q53GD3 710 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 KIAA1614Q5VZ46 1190 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ANKRD26P1Q6NSI1 321 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 FAHD1Q6P587 224 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 UNC5DQ6UXZ4 953 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 IKBIPQ70UQ0 350 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PARS2Q7L3T8 475 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SLC30A8Q8IWU4 369 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 NATD1Q8N6N6 113 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 CYB5D2Q8WUJ1 264 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 IPCEF1Q8WWN9 437 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 NEIL2Q969S2 332 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 FKBP10Q96AY3 582 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 PITX2Q99697 317 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 DOHHQ9BU89 302 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 REEP4Q9H6H4 257 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 KIF17Q9P2E2 1029 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 ENPP5Q9UJA9 477 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 WBP11Q9Y2W2 641 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 SAMHD1Q9Y3Z3 626 aaKnown RBP12.43□□□□□ -0.42
SHMT2-205ENST00000553474 MTCH2Q9Y6C9 303 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 KIAA1549LQ6ZVL6 1849 aa12.43□□□□□ -0.42
SHMT2-205ENST00000553474 LRRK1Q38SD2 2015 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 REV3LO60673 3130 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF99A8MXY4 864 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 MYO1GB0I1T2 1018 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 SLC22A1O15245 554 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 LINC01565O15544 149 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 VEGFDO43915 354 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 PCDH7O60245 1069 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 C1GALT1C1LP0DN25 315 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 ADH5P11766 374 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 DDX5P17844 614 aaKnown RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 BDKRB1P46663 353 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 STT3AP46977 705 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 PREPP48147 710 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 PXNP49023 591 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 ENTPD1P49961 510 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 DAPP51397 102 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 TBPL1P62380 186 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 SELENOWP63302 87 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 SLC35A2P78381 396 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 VLDLRP98155 873 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 PDE7AQ13946 482 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 EIF4HQ15056 248 aaKnown RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 KLHL35Q6PF15 583 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 SYTL1Q8IYJ3 562 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 CLECL1Q8IZS7 167 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 TTC29Q8NA56 475 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 OR9A1PQ8NGU1 263 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 MIPOL1Q8TD10 442 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 ZNF480Q8WV37 535 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 TRUB1Q8WWH5 349 aaKnown RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 C7orf34Q96L11 122 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 TMEM38AQ9H6F2 299 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 MYNNQ9NPC7 610 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 KRT84Q9NSB2 600 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 GALNT8Q9NY28 637 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 VNN3Q9NY84 501 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 PDP1Q9P0J1 537 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-205ENST00000553474 GMPPBQ9Y5P6 360 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 WNT6Q9Y6F9 365 aa12.42□□□□□ -0.42
SHMT2-205ENST00000553474 E9PQ18 207 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 PI15O43692 258 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 LILRB5O75023 590 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RFPL2O75678 378 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CLPXO76031 633 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ETHE1O95571 254 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 B3GALT4O96024 378 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 IFNA14P01570 189 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 NPPBP16860 134 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 ITGA2P17301 1181 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 TEKQ02763 1124 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 HYAL1Q12794 435 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 RPA4Q13156 261 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 C16orf72Q14CZ0 275 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CCDC85BQ15834 202 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-205ENST00000553474 HKDC1Q2TB90 917 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 IQCCQ4KMZ1 466 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 TRIM40Q6P9F5 258 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 CEP68Q76N32 757 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 TMPRSS11BQ86T26 416 aa12.41□□□□□ -0.42
SHMT2-205ENST00000553474 OXR1Q8N573 874 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms