RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CHRNB4P30926 498 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 RPL22P35268 128 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 SKIV2L2P42285 1042 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CYB561P49447 251 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 NR0B1P51843 470 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 ADARP55265 1226 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 MLF1P58340 268 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 TBPL1P62380 186 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 BASP1P80723 227 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 KCTD19Q17RG1 926 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CMPK2Q5EBM0 449 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 MEI1Q5TIA1 1274 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CENPUQ71F23 418 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 SDCCAG8Q86SQ7 713 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 ASPGQ86U10 573 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 SLC26A11Q86WA9 606 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CCDC71Q8IV32 467 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 PRELID2Q8N945 189 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CCDC89Q8N998 374 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 FBXO15Q8NCQ5 510 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 LILRB4Q8NHJ6 448 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 ASB11Q8WXH4 323 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 TMEM125Q96AQ2 219 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 TM4SF19Q96DZ7 209 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 OR1F2PQ96R84 312 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 KIFC1Q9BW19 673 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 TRIM45Q9H8W5 580 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 CCDC177Q9NQR7 707 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 EIF2B3Q9NR50 452 aaKnown RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 PAK5Q9P286 719 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 MED16Q9Y2X0 877 aa8.51□□□□□ -1.05
SYNE2-209ENST00000553308 KLF13Q9Y2Y9 288 aaPredicted RBP8.51□□□□□ -1.05
SYNE2-209ENST00000553308 GFYI3L273 518 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 LCMT2O60294 686 aaKnown RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 PDE9AO76083 593 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 B3GALT4O96024 378 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 FHP07954 510 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 HOXD4P09016 255 aaPredicted RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 HRH2P25021 359 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 HLCSP50747 726 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 GPR85P60893 370 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 OLR1P78380 273 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 MYBPHQ13203 477 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 RPS6KA1Q15418 735 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 KIAA0930Q6ICG6 404 aaPredicted RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 TMEM211Q6ICI0 200 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 PIWIL4Q7Z3Z4 852 aaKnown RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 TGIF2LYQ8IUE0 185 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CILP2Q8IUL8 1156 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 SYCE1Q8N0S2 351 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CYP4X1Q8N118 509 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 POGLUT1Q8NBL1 392 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CAMKVQ8NCB2 501 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 SLC13A3Q8WWT9 602 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 RND1Q92730 232 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 THAP11Q96EK4 314 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 HES6Q96HZ4 224 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 SEC16BQ96JE7 1060 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 PANX2Q96RD6 677 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 TCF12Q99081 682 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CXXC4Q9H2H0 198 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 TP63Q9H3D4 680 aaPredicted RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 TSPY26PQ9H489 355 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 KCNJ16Q9NPI9 418 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CCM2LQ9NUG4 571 aaPredicted RBP8.5□□□□□ -1.05
SYNE2-209ENST00000553308 BFARQ9NZS9 450 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 SOX13Q9UN79 622 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 SLC22A7Q9Y694 548 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 CAPN6Q9Y6Q1 641 aa8.5□□□□□ -1.05
SYNE2-209ENST00000553308 INTS1Q8N201 2190 aaKnown RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 FAM221AA4D161 298 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 SAGE2PA6NJ88 616 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 FCHO1O14526 889 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PFDN6O15212 129 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CHST10O43529 356 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PEX1O43933 1283 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PRMT3O60678 531 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 GALR3O60755 368 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 B4GALT2O60909 372 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 ZWINTO95229 277 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 SLC35G6P0C7Q6 338 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 MPC1LP0DKB6 136 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CDH1P12830 882 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 KLK2P20151 261 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 MAOAP21397 527 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 IL10P22301 178 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 TRHRP34981 398 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 NPY2RP49146 381 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 NUP107P57740 925 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 BTG2P78543 158 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 MPP1Q00013 466 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 MEF2AQ02078 507 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PMPCAQ10713 525 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 TTLL9Q3SXZ7 439 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 DEFB134Q4QY38 66 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 EMC4Q5J8M3 183 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 SEL1L2Q5TEA6 688 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CES4AQ5XG92 561 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms