RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TUBD1Q9UJT1 453 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 SNX6Q9UNH7 406 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PLAAQ9Y263 795 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 KLHL20Q9Y2M5 609 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 SDK2Q58EX2 2172 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 PTPRQQ9UMZ3 2332 aa9.78□□□□□ -0.84
TRAFD1-208ENST00000552890 USP24Q9UPU5 2620 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 LOC105369274A0A096LPK9 316 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 LOC102723532A0A0G2JNH3 316 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PMS2P1A4D2B8 440 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SMIM23A6NLE4 172 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 TK2O00142 265 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PSMD12O00232 456 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 FOXE1O00358 373 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 CLDN4O14493 209 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 TAPBPO15533 448 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 GUCY1B2O75343 617 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 WFS1O76024 890 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 KRT6AP02538 564 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 KRT6BP04259 564 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SERPIND1P05546 499 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 ENO1P06733 434 aaKnown RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 MTHFD2P13995 350 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 LIFP15018 202 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF28P17035 718 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 IMPDH1P20839 514 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 BCL6P41182 706 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 CCR10P46092 362 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SLCO1A2P46721 670 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 GCGRP47871 477 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 KRT6CP48668 564 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 DNAJB13P59910 316 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 IRF9Q00978 393 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SLC18A2Q05940 514 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 IFT88Q13099 833 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 DOC2AQ14183 400 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SLBPQ14493 270 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 GGTA1PQ4G0N0 100 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 TTC19Q6DKK2 380 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 FRMPD2BQ6IN97 320 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 BORAQ6PGQ7 559 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PAGE2Q7Z2X7 111 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 MILR1Q7Z6M3 343 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 FAM20CQ8IXL6 584 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 LAS2Q8IYD9 372 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 OR4N4Q8N0Y3 316 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 L3MBTL4Q8NA19 623 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 METTL21AQ8WXB1 218 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 MIEF2Q96C03 454 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PHF21BQ96EK2 531 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 APOPT1Q96IL0 206 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 QRFPRQ96P65 431 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 UBL7Q96S82 380 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 TMEM79Q9BSE2 394 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 TBCDQ9BTW9 1192 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 ACTL8Q9H568 366 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PRORYQ9H606 182 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 EML4Q9HC35 981 aaKnown RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 MS4A12Q9NXJ0 267 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 IKZF3Q9UKT9 509 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 RUVBL1Q9Y265 456 aaKnown RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 PCDHGB7Q9Y5F8 929 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 V9GYY5 206 aaPredicted RBP9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SPEGQ15772 3267 aa9.77□□□□□ -0.85
TRAFD1-208ENST00000552890 SNRNP200O75643 2136 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SPTBP11277 2137 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 IGLV3-12A0A075B6K2 115 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 LOC101059948A0A1B0GTJ6 334 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 FEZF1A0PJY2 475 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 KRT87PA6NCN2 255 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 E2F3O00716 465 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CDK2AP1O14519 115 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TERTO14746 1132 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TM9SF1O15321 606 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CTIFO43310 598 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 B3GALT2O43825 422 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TIAF1O95411 115 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CHEK2O96017 543 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 SHBGP04278 402 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 HSD3B1P14060 373 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CPA3P15088 417 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 HSD3B2P26439 372 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 EEF1DP29692 281 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TLX1P31314 330 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 GDF5P43026 501 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 AGTR2P50052 363 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 PGGT1BP53609 377 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CDC20Q12834 499 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 LCP2Q13094 533 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TGIF1Q15583 401 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 AP5B1Q2VPB7 878 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 CATSPEREQ5SY80 951 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 ZYG11AQ6WRX3 759 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 TRABD2AQ86V40 505 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 IQCKQ8N0W5 287 aa9.76□□□□□ -0.85
TRAFD1-208ENST00000552890 ENDOVQ8N8Q3 282 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms