RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 MMP11P24347 488 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 ATP5F1P24539 256 aaPredicted RBP9.54□□□□□ -0.88
PFDN5-213ENST00000550964 VARSP26640 1264 aaKnown RBP9.54□□□□□ -0.88
PFDN5-213ENST00000550964 CRHR1P34998 444 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 BCL6P41182 706 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 PIK3CBP42338 1070 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 NFKB2Q00653 900 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 ZNF33BQ06732 778 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 DLG1Q12959 904 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 CHIT1Q13231 466 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 GTF2H2Q13888 395 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 ERV3-1Q14264 604 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 TMEM35AQ53FP2 167 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 CATSPEREQ5SY80 951 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 C1orf189Q5VU69 101 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 GTF2H2CQ6P1K8 395 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 TRIM40Q6P9F5 258 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 FAM199XQ6PEV8 388 aaPredicted RBP9.54□□□□□ -0.88
PFDN5-213ENST00000550964 FAM198BQ6UWH4 519 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 CLEC1AQ8NC01 280 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 LRRN4CLQ8ND94 238 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 MYRIPQ8NFW9 859 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 GAL3ST3Q96A11 431 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 CMTM7Q96FZ5 175 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 GPR78Q96P69 363 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 RHBGQ9H310 441 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 GEMIN8Q9NWZ8 242 aaKnown RBP9.54□□□□□ -0.88
PFDN5-213ENST00000550964 AHSPQ9NZD4 102 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 TRPC4Q9UBN4 977 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 TBK1Q9UHD2 729 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 IL17BQ9UHF5 180 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 IKZF3Q9UKT9 509 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 MRPS33Q9Y291 106 aaKnown RBP9.54□□□□□ -0.88
PFDN5-213ENST00000550964 LAMA5O15230 3695 aa9.54□□□□□ -0.88
PFDN5-213ENST00000550964 FEZF1A0PJY2 475 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 CDC14CA4D256 554 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 VSTM2BA6NLU5 285 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PSMD12O00232 456 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ATXN7O15265 892 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 HCRTR1O43613 425 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 WFS1O76024 890 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 CLDN9O95484 217 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ZGLP1P0C6A0 271 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PYGBP11216 843 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 MTHFD2P13995 350 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PTX3P26022 381 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 GCAP28676 217 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ARL1P40616 181 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 GDF5P43026 501 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 KCNC1P48547 511 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 AGTR2P50052 363 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 CCNG1P51959 295 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PGGT1BP53609 377 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 IRF9Q00978 393 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 BIKQ13323 160 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 DOC2AQ14183 400 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 SLBPQ14493 270 aaKnown RBP eCLIP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 SLC9A5Q14940 896 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 NKG7Q16617 165 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 HKDC1Q2TB90 917 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 VN1R4Q7Z5H5 301 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 GSPT2Q8IYD1 628 aaKnown RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 LAS2Q8IYD9 372 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 TEX9Q8N6V9 391 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PTGR2Q8N8N7 351 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ARMC2Q8NEN0 867 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 STT3BQ8TCJ2 826 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 KCNC2Q96PR1 638 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 SMC6Q96SB8 1091 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 TMEM79Q9BSE2 394 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 TBCDQ9BTW9 1192 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 NTMT1Q9BV86 223 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 UNKQ9C0B0 810 aaKnown RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 IPPKQ9H8X2 491 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 COPS7BQ9H9Q2 264 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ACSS2Q9NR19 701 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 STARD5Q9NSY2 213 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 ARGLU1Q9NWB6 273 aaPredicted RBP9.53□□□□□ -0.88
PFDN5-213ENST00000550964 PPT2Q9UMR5 302 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
PFDN5-213ENST00000550964 MGAQ8IWI9 3026 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 CELSR3Q9NYQ7 3312 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 TLDC2A0PJX2 215 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 H0YIV9 168 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 CLDN4O14493 209 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 NKX2-8O15522 239 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 LCMT2O60294 686 aaKnown RBP9.52□□□□□ -0.89
PFDN5-213ENST00000550964 GALR3O60755 368 aaPredicted RBP9.52□□□□□ -0.89
PFDN5-213ENST00000550964 KLF7O75840 302 aaPredicted RBP9.52□□□□□ -0.89
PFDN5-213ENST00000550964 ALPPP05187 535 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 CAPN1P07384 714 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 HEXBP07686 556 aa9.52□□□□□ -0.89
PFDN5-213ENST00000550964 PRKAR1AP10644 381 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms