RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PLA2G3Q9NZ20 509 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 NAALAD2Q9Y3Q0 740 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 PCDHGB6Q9Y5F9 930 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 CCDC88CQ9P219 2028 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 DOPEY1Q5JWR5 2465 aa10.27□□□□□ -0.77
VTI1BP3-201ENST00000550220 HIVEP3Q5T1R4 2406 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 E7ESA3 106 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 EIF3HO15372 352 aaKnown RBP eCLIP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 GALR3O60755 368 aaPredicted RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 PRAMEF2O60811 474 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 JRKO75564 520 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 RASAL1O95294 804 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 GUCA1CO95843 209 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 WDPCPO95876 746 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 FHP07954 510 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 STSP08842 583 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ITGAMP11215 1152 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 SCTRP47872 440 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 TAS2R50P59544 299 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 POU4F1Q01851 419 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF33BQ06732 778 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 CALCOCO2Q13137 446 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 MEP1AQ16819 746 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 CDKL4Q5MAI5 379 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 HP1BP3Q5SSJ5 553 aaPredicted RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 H3F3CQ6NXT2 135 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 MTFR2Q6P444 385 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 TRMT10BQ6PF06 316 aaKnown RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 SBSNQ6UWP8 590 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 CYS1Q717R9 158 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 MAATS1Q7Z4T9 603 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ANKRD37Q7Z713 158 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 THOC6Q86W42 341 aaKnown RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZC3HC1Q86WB0 502 aaKnown RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC34A3Q8N130 599 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC5A8Q8N695 610 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ARMC2Q8NEN0 867 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZCCHC10Q8TBK6 192 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 PYROXD1Q8WU10 500 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 NR4A3Q92570 626 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 PYCR2Q96C36 320 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 TSPAN17Q96FV3 270 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 OLFM1Q99784 485 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 MACROD1Q9BQ69 325 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 MESP1Q9BRJ9 268 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 PITHD1Q9GZP4 211 aaPredicted RBP10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 RHOJQ9H4E5 214 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 KCNK13Q9HB14 408 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 PLAC1Q9HBJ0 212 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 GPAMQ9HCL2 828 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 HCN3Q9P1Z3 774 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 TXNDC16Q9P2K2 825 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
VTI1BP3-201ENST00000550220 A0A088AWK7 358 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 FAM95CA0A1B0GW59 222 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SYNDIG1LA6NDD5 238 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 FAM187AA6NFU0 413 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 A8MUI8 341 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 PSMD12O00232 456 aaPredicted RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 E2F3O00716 465 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 TTI1O43156 1089 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 LRRTM2O43300 516 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 RDH16O75452 317 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SEC24DO94855 1032 aaPredicted RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 STATHP02808 62 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SERPIND1P05546 499 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SERPINA6P08185 405 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 GSTA2P09210 222 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 GNAZP19086 355 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF10P21506 573 aaPredicted RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SAT1P21673 171 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 RBPJQ06330 500 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ABRAXAS2Q15018 415 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 PPP1R3AQ16821 1122 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 DEFB134Q4QY38 66 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SFT2D3Q587I9 215 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ACER2Q5QJU3 275 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF324BQ6AW86 544 aaPredicted RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 NXPE4Q6UWF7 544 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 FRA10AC1Q70Z53 315 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 PRSS41Q7RTY9 318 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 PDSS2Q86YH6 399 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ANKMY2Q8IV38 441 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 TCAIMQ8N3R3 496 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF740Q8NDX6 193 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 FBXO36Q8NEA4 188 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 NEIL2Q969S2 332 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 RELTQ969Z4 430 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 PEX11GQ96HA9 241 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR4K3Q96R72 315 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 EGFL8Q99944 293 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 UTP23Q9BRU9 249 aaKnown RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 CNOT10Q9H9A5 744 aaKnown RBP10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 WHRNQ9P202 907 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SH2B3Q9UQQ2 575 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC22A14Q9Y267 594 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 OARD1Q9Y530 152 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 HEATR5BQ9P2D3 2071 aa10.25□□□□□ -0.77
VTI1BP3-201ENST00000550220 DOCK10Q96BY6 2186 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms