RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 TYROBPO43914 113 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 SRPX2O60687 465 aaPredicted RBP12.76□□□□□ -0.37
NUP188-211ENST00000550219 CBX6O95503 412 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 C8GP07360 202 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ACPPP15309 386 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 RPA3P35244 121 aaPredicted RBP12.76□□□□□ -0.37
NUP188-211ENST00000550219 OCA2Q04671 838 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 KLC1Q07866 573 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ACAP2Q15057 778 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 TSNAXIP1Q2TAA8 658 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 LINC00696Q6ZRV3 163 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 SPATA6LQ8N4H0 392 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 FBXO15Q8NCQ5 510 aaPredicted RBP12.76□□□□□ -0.37
NUP188-211ENST00000550219 PPFIBP2Q8ND30 876 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 OR11G2Q8NGC1 345 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 STT3BQ8TCJ2 826 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 PPP4R1Q8TF05 950 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 MIEF2Q96C03 454 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 C8orf44Q96CB5 159 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 C10orf90Q96M02 699 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ZFYVE21Q9BQ24 234 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 LHPPQ9H008 270 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 EPS8L2Q9H6S3 715 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ZNF160Q9HCG1 818 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
NUP188-211ENST00000550219 SEMA3GQ9NS98 782 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ZNF358Q9NW07 568 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 ZNF282Q9UDV7 671 aaPredicted RBP12.76□□□□□ -0.37
NUP188-211ENST00000550219 TAC3Q9UHF0 121 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 C3orf18Q9UK00 162 aa12.76□□□□□ -0.37
NUP188-211ENST00000550219 OR2A25A4D2G3 310 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 HMGB1P1B2RPK0 211 aaPredicted RBP12.75□□□□□ -0.37
NUP188-211ENST00000550219 CDC7O00311 574 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 GLRA3O75311 464 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 DDAH2O95865 285 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 ONECUT2O95948 504 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 CATP04040 527 aaKnown RBP12.75□□□□□ -0.37
NUP188-211ENST00000550219 TFEBP19484 476 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 COL8A1P27658 744 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 CCT5P48643 541 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 SOX8P57073 446 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
NUP188-211ENST00000550219 EEF1A2Q05639 463 aaKnown RBP12.75□□□□□ -0.37
NUP188-211ENST00000550219 CDC16Q13042 620 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 SP140Q13342 867 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 NAA25Q14CX7 972 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 MUM1Q2TAK8 710 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 VWA2Q5GFL6 755 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 FAAH2Q6GMR7 532 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 SBSNQ6UWP8 590 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 ADAMTSL2Q86TH1 951 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 CSNK1A1LQ8N752 337 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 GOLGA6L1Q8N7Z2 621 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 OR9A1PQ8NGU1 263 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 RHEBL1Q8TAI7 183 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 DNAJB14Q8TBM8 379 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 APOPT1Q96IL0 206 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 C5orf34Q96MH7 638 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 AGPAT4Q9NRZ5 378 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 ADAMTS6Q9UKP5 1117 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 SLC5A6Q9Y289 635 aa12.75□□□□□ -0.37
NUP188-211ENST00000550219 NAV2Q8IVL1 2488 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 USP9XQ93008 2570 aaPredicted RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 NPEPPSL1A6NEC2 478 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 VSTM2BA6NLU5 285 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 H0YGG7 62 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 COPEO14579 308 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 PRPF4O43172 522 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP188-211ENST00000550219 STATHP02808 62 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 ENO2P09104 434 aaPredicted RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 RBP1P09455 135 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 ZGLP1P0C6A0 271 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 KCNC1P48547 511 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 SLC18A1P54219 525 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 PNLIPRP1P54315 467 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 ARF3P61204 181 aaPredicted RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 Q0VFX4 171 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 ZNF169Q14929 603 aaPredicted RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 OR4D1Q15615 310 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 TSNQ15631 228 aaKnown RBP12.74□□□□□ -0.37
NUP188-211ENST00000550219 PPP1R3AQ16821 1122 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 HKDC1Q2TB90 917 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 TECRLQ5HYJ1 363 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 PRMT9Q6P2P2 845 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 KLC3Q6P597 504 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 STAG3L4Q8TBR4 150 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 NACC2Q96BF6 587 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 ATOH8Q96SQ7 321 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 PKP4Q99569 1192 aa12.74□□□□□ -0.37
NUP188-211ENST00000550219 MRPL57Q9BQC6 102 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms