RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 SERPINA6P08185 405 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 SLC35G6P0C7Q6 338 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 SEPHS1P49903 392 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 ARF3P61204 181 aaPredicted RBP27.47■■□□□ 1.99
BRF1-213ENST00000548421 ERVK-8P63133 956 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 PWP1Q13610 501 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 SMU1Q2TAY7 513 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 KHDRBS2Q5VWX1 349 aaKnown RBP27.47■■□□□ 1.99
BRF1-213ENST00000548421 CHSY3Q70JA7 882 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 ZFAND4Q86XD8 727 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 FNDC5Q8NAU1 212 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 TM4SF19Q96DZ7 209 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 METTL2AQ96IZ6 378 aaKnown RBP27.47■■□□□ 1.99
BRF1-213ENST00000548421 SLC41A2Q96JW4 573 aa27.47■■□□□ 1.99
BRF1-213ENST00000548421 SPEGQ15772 3267 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 RPL38P63173 70 aaKnown RBP27.46■■□□□ 1.99
BRF1-213ENST00000548421 RGS1Q08116 209 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 DEFB110Q30KQ9 67 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 DEPDC1Q5TB30 811 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 MCATQ8IVS2 390 aaKnown RBP27.46■■□□□ 1.99
BRF1-213ENST00000548421 ZNF655Q8N720 491 aaPredicted RBP27.46■■□□□ 1.99
BRF1-213ENST00000548421 CAMKVQ8NCB2 501 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 NT5CQ8TCD5 201 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 APIPQ96GX9 242 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 CENPKQ9BS16 269 aa27.46■■□□□ 1.99
BRF1-213ENST00000548421 LOC105369274A0A096LPK9 316 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 LOC102723532A0A0G2JNH3 316 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 LRIT2A6NDA9 550 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 UBDO15205 165 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 DCTN3O75935 186 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 SEMA3DO95025 777 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 STATHP02808 62 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 NELFEP18615 380 aaKnown RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 EMX2Q04743 252 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 TBL3Q12788 808 aaKnown RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 MAD2L1Q13257 205 aaPredicted RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 RFTN2Q52LD8 501 aaPredicted RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 SPIN4Q56A73 249 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 TMEM198Q66K66 360 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 ARHGAP22Q7Z5H3 698 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 SPATA19Q7Z5L4 167 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 OR4N4Q8N0Y3 316 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 D2HGDHQ8N465 521 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 CCDC74BQ96LY2 380 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 MRPL1Q9BYD6 325 aaKnown RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 REXO4Q9GZR2 422 aaKnown RBP27.45■■□□□ 1.99
BRF1-213ENST00000548421 PLCL2Q9UPR0 1127 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 TMED5Q9Y3A6 229 aa27.45■■□□□ 1.99
BRF1-213ENST00000548421 HCRTR1O43613 425 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 SRPX2O60687 465 aaPredicted RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 NCF2P19878 526 aaPredicted RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 HNRNPH1P31943 449 aaKnown RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 GABRA4P48169 554 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 STXBP1P61764 594 aaKnown RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 HYAL2Q12891 473 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 KIAA0040Q15053 153 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 ADPRMQ3LIE5 342 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 TMEM35AQ53FP2 167 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 TMTC4Q5T4D3 741 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 SLITRK4Q8IW52 837 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 F2RL3Q96RI0 385 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 MACROD1Q9BQ69 325 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 SLC6A16Q9GZN6 736 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 COL27A1Q8IZC6 1860 aaPredicted RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 SAP18O00422 153 aaKnown RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 P2RX6O15547 441 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 CCDC22O60826 627 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 RFPL3O75679 317 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 ALDOCP09972 364 aaKnown RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 VSX2P58304 361 aaPredicted RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 E2F1Q01094 437 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 ACSM2AQ08AH3 577 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 ACSM2BQ68CK6 577 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 MTDHQ86UE4 582 aaKnown RBP27.44■■□□□ 1.98
BRF1-213ENST00000548421 CSNK1A1LQ8N752 337 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 CHTF18Q8WVB6 975 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 FAM122AQ96E09 287 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 CATSPER2Q96P56 530 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 C1orf50Q9BV19 199 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 AHSPQ9NZD4 102 aa27.44■■□□□ 1.98
BRF1-213ENST00000548421 EIF2S1P05198 315 aaKnown RBP27.43■■□□□ 1.98
BRF1-213ENST00000548421 RAP1GDS1P52306 607 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 KCNAB1Q14722 419 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 TOR1AIP1Q5JTV8 583 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 MANEAQ5SRI9 462 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 METTL4Q8N3J2 472 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 C1orf52Q8N6N3 182 aaKnown RBP27.43■■□□□ 1.98
BRF1-213ENST00000548421 N4BP2L2Q92802 583 aaPredicted RBP27.43■■□□□ 1.98
BRF1-213ENST00000548421 NLNQ9BYT8 704 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 NMUR2Q9GZQ4 415 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 NOP53Q9NZM5 478 aaKnown RBP27.43■■□□□ 1.98
BRF1-213ENST00000548421 G3BP2Q9UN86 482 aaKnown RBP27.43■■□□□ 1.98
BRF1-213ENST00000548421 PCDHGA1Q9Y5H4 931 aa27.43■■□□□ 1.98
BRF1-213ENST00000548421 PCNX2A6NKB5 2137 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 ZSCAN9O15535 394 aaPredicted RBP27.42■■□□□ 1.98
BRF1-213ENST00000548421 MSL3P1P0C860 447 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 ACPPP15309 386 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 PLA2G5P39877 138 aa27.42■■□□□ 1.98
BRF1-213ENST00000548421 TRA2AQ13595 282 aaKnown RBP eCLIP27.42■■□□□ 1.98
BRF1-213ENST00000548421 TRIP6Q15654 476 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms