RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 FAM129AQ9BZQ8 928 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 RNF32Q9H0A6 362 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
CPSF6-204ENST00000547486 CORO1CQ9ULV4 474 aaPredicted RBP12.58□□□□□ -0.4
CPSF6-204ENST00000547486 TRBC2A0A5B9 178 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 OR5H15A6NDH6 313 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 NDUFS4O43181 175 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 GALR3O60755 368 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-204ENST00000547486 PIAS1O75925 651 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
CPSF6-204ENST00000547486 UQCRHP07919 91 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 CYC1P08574 325 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 STSP08842 583 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SAT1P21673 171 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SCTRP47872 440 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 TAS2R39P59534 338 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 OLR1P78380 273 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 MRPS25P82663 173 aaKnown RBP12.57□□□□□ -0.4
CPSF6-204ENST00000547486 PWP1Q13610 501 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 CSHL1Q14406 222 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF460Q14592 562 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 ABRAXAS2Q15018 415 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 NSDHLQ15738 373 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 ABHD17BQ5VST6 288 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 ZC3HC1Q86WB0 502 aaKnown RBP12.57□□□□□ -0.4
CPSF6-204ENST00000547486 ANKRD49Q8WVL7 239 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SLC5A11Q8WWX8 675 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 TSLPQ969D9 159 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SLC22A14Q9Y267 594 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 SAR1BQ9Y6B6 198 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 TEX15Q9BXT5 2789 aa12.57□□□□□ -0.4
CPSF6-204ENST00000547486 DOPEY1Q5JWR5 2465 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 UNC79Q9P2D8 2635 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 CHST10O43529 356 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 SERPIND1P05546 499 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ENO2P09104 434 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF37AP17032 561 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ALOX12P18054 663 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 CD96P40200 585 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 HNF4AP41235 474 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 RPL21P46778 160 aaKnown RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 AGTR2P50052 363 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ARL4CP56559 192 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 AP2B1P63010 937 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 MGAT5Q09328 741 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 HYAL2Q12891 473 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 HERC3Q15034 1050 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 C18orf21Q32NC0 220 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 SFT2D3Q587I9 215 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ACER2Q5QJU3 275 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 C1QL3Q5VWW1 255 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 STRA8Q7Z7C7 330 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 THOC6Q86W42 341 aaKnown RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 LURAP1LQ8IV03 231 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 BEST3Q8N1M1 668 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ANKRD53Q8N9V6 530 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 NT5CQ8TCD5 201 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 UTP15Q8TED0 518 aaKnown RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ATL1Q8WXF7 558 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 NR4A3Q92570 626 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 KLHL31Q9H511 634 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 KCNK13Q9HB14 408 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 SMYD2Q9NRG4 433 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ANKRD10Q9NXR5 420 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 C19orf25Q9UFG5 118 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-204ENST00000547486 ZFP69BQ9UJL9 534 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 SNX24Q9Y343 169 aa12.56□□□□□ -0.4
CPSF6-204ENST00000547486 FAM95CA0A1B0GW59 222 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 NPEPPSL1A6NEC2 478 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 MAGEB17A8MXT2 336 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 E7ESA3 106 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 FAM227AF5H4B4 570 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ZG16O60844 167 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 RASAL1O95294 804 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 FHP07954 510 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-204ENST00000547486 SMIM10L1P0DMW3 83 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 IL10P22301 178 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 RAB8AP61006 207 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 BTG2P78543 158 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 PMP22Q01453 160 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ACTN3Q08043 901 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ZRSR2Q15696 482 aaKnown RBP12.55□□□□□ -0.4
CPSF6-204ENST00000547486 INAQ16352 499 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 PAPD4Q6PIY7 484 aaKnown RBP12.55□□□□□ -0.4
CPSF6-204ENST00000547486 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 FJX1Q86VR8 437 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 CRLF3Q8IUI8 442 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 M1APQ8TC57 530 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 RELTQ969Z4 430 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms