RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 VLDLRP98155 873 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 SYCE2Q6PIF2 218 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 CEP68Q76N32 757 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 LRRTM4Q86VH4 590 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 RNF130Q86XS8 419 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 EID3Q8N140 333 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 CNIH3Q8TBE1 160 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 TSACCQ96A04 125 aaPredicted RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 HSH2DQ96JZ2 352 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 C17orf62Q9BQA9 187 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 MRPS26Q9BYN8 205 aaKnown RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 NAA50Q9GZZ1 169 aaKnown RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 CAPN10Q9HC96 672 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 DYTNA2CJ06 578 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 M0R129 80 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 QSOX1O00391 747 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 RB1P06400 928 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 FMO3P31513 532 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 HPCAL1P37235 193 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 NR1H2P55055 460 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 TAS2R38P59533 333 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 ESRRGP62508 458 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 RAE1P78406 368 aaKnown RBP12.22□□□□□ -0.45
SCAF11-209ENST00000547018 DGCR6Q14129 220 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 IRF4Q15306 451 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 ANKRA2Q9H9E1 313 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 SLC27A6Q9Y2P4 619 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 ASXL3Q9C0F0 2248 aa12.22□□□□□ -0.45
SCAF11-209ENST00000547018 PLXNB3Q9ULL4 1909 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 VILLO15195 856 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 POU1F1P28069 291 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 RNF144AP50876 292 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 DUSP6Q16828 381 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF761Q86XN6 746 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 DEFB119Q8N690 84 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 AMER3Q8N944 861 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 SLC35A5Q9BS91 424 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 ASPSCR1Q9BZE9 553 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 ORC6Q9Y5N6 252 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 POM121BA6NF01 834 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 UMPSP11172 480 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 TIA1P31483 386 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 PAGE2BQ5JRK9 111 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 GRHL2Q6ISB3 625 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 NXPE4Q6UWF7 544 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 TMEM26Q6ZUK4 368 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 ZNF555Q8NEP9 628 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 OR10G6Q8NH81 332 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 NFKBIDQ8NI38 313 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 DGCR14Q96DF8 476 aaKnown RBP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 PYURFQ96I23 114 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 REXO5Q96IC2 774 aaKnown RBP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 RAD18Q9NS91 495 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 IFT80Q9P2H3 777 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-209ENST00000547018 EBF1Q9UH73 591 aa12.21□□□□□ -0.45
SCAF11-209ENST00000547018 ISM1B1AKI9 464 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 M0QX08 132 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 SCAMP2O15127 329 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 WNT3P56703 355 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 OCA2Q04671 838 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 SRSF11Q05519 484 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 FGL2Q14314 439 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 GBX1Q14549 363 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 SKIV2LQ15477 1246 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 VMACQ2NL98 169 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 ITPRIPL2Q3MIP1 535 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 GPR141Q7Z602 305 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 KIAA0907Q7Z7F0 614 aaPredicted RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 OR4E2Q8NGC2 313 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 OR56A3Q8NH54 315 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 HM13Q8TCT9 377 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 COL26A1Q96A83 441 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 UHRF1Q96T88 793 aaPredicted RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 DCAF13Q9NV06 445 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 TRPC4Q9UBN4 977 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 MSRAQ9UJ68 235 aa12.21□□□□□ -0.46
SCAF11-209ENST00000547018 NDRG2Q9UN36 371 aaKnown RBP12.21□□□□□ -0.46
SCAF11-209ENST00000547018 ZDBF2Q9HCK1 2354 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 SLC16A5O15375 505 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 SCELO95171 688 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 KCNK5O95279 499 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 DNTTP04053 509 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 FUT4P22083 530 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 ALDH4A1P30038 563 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 KDELR2P33947 212 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 DCTP40126 519 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 CLCN2P51788 898 aa12.2□□□□□ -0.46
SCAF11-209ENST00000547018 MAPK12P53778 367 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms