RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MRPS10P82664 201 aaKnown RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 METTL11BQ5VVY1 283 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TXNRD3NBQ6F5E7 133 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SERPINA9Q86WD7 417 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ZFAND4Q86XD8 727 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CILP2Q8IUL8 1156 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ADGRG2Q8IZP9 1017 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF514Q96K75 400 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 LPIN3Q9BQK8 851 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 DOHHQ9BU89 302 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 KCNK13Q9HB14 408 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ASF1AQ9Y294 204 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 PCDHGA7Q9Y5G6 932 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CCL15-CCL14A0A0B4J2E2 113 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SMIM35A0A1B0GVV1 85 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ACADMP11310 421 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 GPR1P46091 355 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SCNN1GP51170 649 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CCL15Q16663 113 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SPANXN4Q5MJ08 99 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF227Q86WZ6 799 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 OR8K5Q8NH50 307 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CNIH3Q8TBE1 160 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 COL26A1Q96A83 441 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SLC35A5Q9BS91 424 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SLC6A16Q9GZN6 736 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SDR39U1Q9NRG7 319 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 C14orf119Q9NWQ9 140 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 MEIOCA2RUB1 952 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TP73O15350 636 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 B4GALT5O43286 388 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 FGF4P08620 206 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ITGAMP11215 1152 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CKBP12277 381 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 OR3A3P47888 321 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 OR3A2P47893 321 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 STC1P52823 247 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 NCS1P62166 190 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SLC10A7Q0GE19 358 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SP140Q13342 867 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TUSC3Q13454 348 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 KCNC3Q14003 757 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TICAM1Q8IUC6 712 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 PQLC3Q8N755 202 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SNAPC3Q92966 411 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 COQ10AQ96MF6 247 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CNOT2Q9NZN8 540 aaKnown RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CLCA3PQ9Y6N3 262 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 LAMA4Q16363 1823 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 SMIM28A0A1B0GU29 152 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 MANBAO00462 879 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ADAP00813 363 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 RPS3AP61247 264 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 OGDHQ02218 1023 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 GAS6Q14393 721 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ARL9Q6T311 187 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ARSKQ6UWY0 536 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CREB3L2Q70SY1 520 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 SLC7A5P1Q8MH63 180 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CHST4Q8NCG5 386 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 L3HYPDHQ96EM0 354 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 BARD1Q99728 777 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 NOP16Q9Y3C1 178 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 FSHRP23945 695 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CA5AP35218 305 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CDK5R2Q13319 367 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ESCO2Q56NI9 601 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 REEP3Q6NUK4 255 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 RETREG3Q86VR2 466 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CIR1Q86X95 450 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 GALNT11Q8NCW6 608 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 COQ8AQ8NI60 647 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ADAMTS19Q8TE59 1207 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 GMLQ99445 158 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 TSSK6Q9BXA6 273 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ZDHHC6Q9H6R6 413 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 NLGN3Q9NZ94 848 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 GALPQ9UBC7 116 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 CDH7Q9ULB5 785 aa12.4□□□□□ -0.42
PTCH1-212ENST00000546744 A8MV72 311 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-212ENST00000546744 PCDH17O14917 1159 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms