RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TSPAN10Q9H1Z9 355 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-221ENST00000546229 C19orf25Q9UFG5 118 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-221ENST00000546229 FBXO5Q9UKT4 447 aa11.8□□□□□ -0.52
COPS7A-221ENST00000546229 NAALAD2Q9Y3Q0 740 aa11.8□□□□□ -0.52
COPS7A-221ENST00000546229 COMMD10Q9Y6G5 202 aa11.8□□□□□ -0.52
COPS7A-221ENST00000546229 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
COPS7A-221ENST00000546229 GABRR3A8MPY1 467 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 A8MUI8 341 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 ZBTB14O43829 449 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NME2P1O60361 137 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 GALR3O60755 368 aaPredicted RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 B3GALT4O96024 378 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 SNRPB2P08579 225 aaKnown RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 COX6B1P14854 86 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NPPBP16860 134 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 IGFBP2P18065 325 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NME2P22392 152 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 CXCR5P32302 372 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 TERF1P54274 439 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 CDKN2DP55273 166 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 HSF1Q00613 529 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 HYAL2Q12891 473 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 SP140Q13342 867 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 MEP1AQ16819 746 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 AGTRAPQ6RW13 159 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 GSTA5Q7RTV2 222 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 GALNTL5Q7Z4T8 443 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 RASGEF1CQ8N431 466 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 MFSD9Q8NBP5 474 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 CAMKVQ8NCB2 501 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 C2CD4AQ8NCU7 369 aaPredicted RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NFAM1Q8NET5 270 aaPredicted RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 SUN3Q8TAQ9 357 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 EEF1AKMT1Q8WVE0 214 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 MAIP1Q8WWC4 291 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 PEX11GQ96HA9 241 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 NDNQ99608 321 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 ENKD1Q9H0I2 346 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 KCNK13Q9HB14 408 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 XAB2Q9HCS7 855 aaKnown RBP11.79□□□□□ -0.52
COPS7A-221ENST00000546229 KLHL1Q9NR64 748 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 ABCF3Q9NUQ8 709 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 CLDN16Q9Y5I7 305 aa11.79□□□□□ -0.52
COPS7A-221ENST00000546229 HRNRQ86YZ3 2850 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 SDR42E2A6NKP2 422 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CDC123O75794 336 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CLDN14O95500 239 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 FHP07954 510 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 TPP2P29144 1249 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 TRHRP34981 398 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 PGGT1BP53609 377 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 RIPPLY3P57055 190 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 RBPJQ06330 500 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 KRTCAP3Q53RY4 240 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 THEMIS2Q5TEJ8 643 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CAPN13Q6MZZ7 669 aaPredicted RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 STRA8Q7Z7C7 330 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 DOLPP1Q86YN1 238 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 CNTN4Q8IWV2 1026 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 LMNTD2Q8IXW0 634 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 MARVELD2Q8N4S9 558 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 OR56A3Q8NH54 315 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 SLC13A3Q8WWT9 602 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 C14orf79Q96F83 325 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 OLFM1Q99784 485 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 UTP23Q9BRU9 249 aaKnown RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 WDR83Q9BRX9 315 aaKnown RBP11.78□□□□□ -0.52
COPS7A-221ENST00000546229 PCBD2Q9H0N5 130 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 ATG10Q9H0Y0 220 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 ANKHQ9HCJ1 492 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 IKZF3Q9UKT9 509 aa11.78□□□□□ -0.52
COPS7A-221ENST00000546229 HCFC1P51610 2035 aa11.77□□□□□ -0.52
COPS7A-221ENST00000546229 MED13LQ71F56 2210 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 MAGEB16A2A368 324 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 NPIPA5E9PKD4 350 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 GOLGA8MH3BSY2 632 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 CDK2AP1O14519 115 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 TTI1O43156 1089 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 ASNA1O43681 348 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 CEP104O60308 925 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 KRT14P02533 472 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 C8GP07360 202 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 UQCRHP07919 91 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SP1P08047 785 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 SMIM10L1P0DMW3 83 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 IL10P22301 178 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 EEF1DP29692 281 aaKnown RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 MEF2AQ02078 507 aaPredicted RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 ALDH6A1Q02252 535 aaKnown RBP11.77□□□□□ -0.53
COPS7A-221ENST00000546229 NAE1Q13564 534 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 CRYMQ14894 314 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 NSDHLQ15738 373 aa11.77□□□□□ -0.53
COPS7A-221ENST00000546229 PPP1R3AQ16821 1122 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms