RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
TSEN54-203ENST00000545228 ASCL3Q9NQ33 180 aa13.23□□□□□ -0.29
TSEN54-203ENST00000545228 GEMIN8Q9NWZ8 242 aaKnown RBP13.23□□□□□ -0.29
TSEN54-203ENST00000545228 SLC17A7Q9P2U7 560 aa13.23□□□□□ -0.29
TSEN54-203ENST00000545228 KLHL20Q9Y2M5 609 aa13.23□□□□□ -0.29
TSEN54-203ENST00000545228 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
TSEN54-203ENST00000545228 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 CDRT15L2A8MXV6 281 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 TMEM114B3SHH9 223 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-203ENST00000545228 H0YGG7 62 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 H0YIV9 168 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 NDUFS4O43181 175 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 WFS1O76024 890 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 SERPINA6P08185 405 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 ALDH3A1P30838 453 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 PIK3CBP42338 1070 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 ETV4P43268 484 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 GABRA4P48169 554 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 ARF3P61204 181 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-203ENST00000545228 PPP2R2AP63151 447 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 FAM53BQ14153 422 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 HERC3Q15034 1050 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 WASHC2DQ5SRD0 308 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 RHBDD2Q6NTF9 364 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 CCT6BQ92526 530 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 ROGDIQ9GZN7 287 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 TMEM184BQ9Y519 407 aaPredicted RBP13.22□□□□□ -0.29
TSEN54-203ENST00000545228 B3GALT1Q9Y5Z6 326 aa13.22□□□□□ -0.29
TSEN54-203ENST00000545228 A0A1B0GX78 115 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 FEZF1A0PJY2 475 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 C9J4A7 227 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 DSCR3O14972 297 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 PRAMEF10O60809 474 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 SASH3O75995 380 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 STK17BO94768 372 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 ESRRBO95718 433 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 SERPINE1P05121 402 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 SERPIND1P05546 499 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 LIPCP11150 499 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 PCNAP12004 261 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 HSD3B1P14060 373 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 CREB1P16220 341 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 HSD3B2P26439 372 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 VARSP26640 1264 aaKnown RBP13.21□□□□□ -0.29
TSEN54-203ENST00000545228 SLC5A2P31639 672 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 BCL6P41182 706 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 AVPR1BP47901 424 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 ARFIP1P53367 373 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 RCN2Q14257 317 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 TMEM35AQ53FP2 167 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 UNC50Q53HI1 259 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 FBXO42Q6P3S6 717 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 TRIM40Q6P9F5 258 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 CHSY3Q70JA7 882 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 OR1L3Q8NH93 324 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 NT5CQ8TCD5 201 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 KIAA1143Q96AT1 154 aaPredicted RBP13.21□□□□□ -0.29
TSEN54-203ENST00000545228 ARL8AQ96BM9 186 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 CMTM7Q96FZ5 175 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 RHBGQ9H310 441 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 GSTO2Q9H4Y5 243 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 CLK4Q9HAZ1 481 aaKnown RBP13.21□□□□□ -0.29
TSEN54-203ENST00000545228 MID1IP1Q9NPA3 183 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 CUTCQ9NTM9 273 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 PSD3Q9NYI0 1048 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 PPT2Q9UMR5 302 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 SH2B3Q9UQQ2 575 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 ASB1Q9Y576 335 aa13.21□□□□□ -0.29
TSEN54-203ENST00000545228 HYKKA2RU49 373 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 AGRPO00253 132 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 OR7A17O14581 309 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ZNF749O43361 778 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 KIAA0754O94854 1291 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 SPTBP11277 2137 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 NR1D1P20393 614 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ETV5P41161 510 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 TSFMP43897 325 aaKnown RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 CDH13P55290 713 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 MEF2AQ02078 507 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 TRAF3Q13114 568 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 PRTGQ2VWP7 1150 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 TTMPQ5BVD1 217 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 FRMPD2BQ6IN97 320 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
TSEN54-203ENST00000545228 NLGN4YQ8NFZ3 816 aaPredicted RBP13.2□□□□□ -0.3
TSEN54-203ENST00000545228 OR7G3Q8NG95 312 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms