RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 ZNF585AQ6P3V2 769 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 B3GNT6Q6ZMB0 384 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 OTOAQ7RTW8 1153 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 WDR53Q7Z5U6 358 aaPredicted RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 LRRC56Q8IYG6 542 aaPredicted RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 ARMC10Q8N2F6 343 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 CIARTQ8N365 385 aaPredicted RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 FAM71DQ8N9W8 422 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 KCT2Q8NC54 265 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 LRRN4CLQ8ND94 238 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 NFAM1Q8NET5 270 aaPredicted RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 MAGEC3Q8TD91 643 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 ZNF480Q8WV37 535 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 SLCO2A1Q92959 643 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 FAM136AQ96C01 138 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 FOPNLQ96NB1 174 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 PRAP1Q96NZ9 151 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 OSBPL8Q9BZF1 889 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 NHEJ1Q9H9Q4 299 aaPredicted RBP8.77□□□□□ -1.01
CHD4-212ENST00000545083 CATSPERZQ9NTU4 200 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 ABCF3Q9NUQ8 709 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 ADAM21Q9UKJ8 722 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 RIMKLBQ9ULI2 386 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 EDARQ9UNE0 448 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD4-212ENST00000545083 MRFAP1Q9Y605 127 aa8.77□□□□□ -1.01
CHD4-212ENST00000545083 A0A0G2JMM0 328 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 A0A1W2PPB8 328 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 A0A1W2PRS3 328 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 KIR3DP1A8MWS1 328 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 SMAPO00193 183 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 SLC16A5O15375 505 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 NIPSNAP2O75323 286 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 PSIP1O75475 530 aaKnown RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 CCNDBP1O95273 360 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 SLC16A8O95907 504 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 UQCRC1P31930 480 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 COILP38432 576 aaPredicted RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 HADHBP55084 474 aaKnown RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 PPIAP62937 165 aaKnown RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 PRAMEP78395 509 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 ABATP80404 500 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 MPP1Q00013 466 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 CDH17Q12864 832 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 KEAP1Q14145 624 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 ARHGAP19Q14CB8 494 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 SLC25A35Q3KQZ1 300 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 ANKRD20A4Q4UJ75 823 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 FLYWCH1Q4VC44 716 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 LUZP1Q86V48 1076 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 CYP4Z2PQ8N1L4 340 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 RELL2Q8NC24 303 aaPredicted RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 OR8K1Q8NGG5 319 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 MCOLN3Q8TDD5 553 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 PANX3Q96QZ0 392 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 SMC6Q96SB8 1091 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 ZNF395Q9H8N7 513 aaPredicted RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 PLEKHF2Q9H8W4 249 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 ZDHHC11Q9H8X9 412 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 UTP6Q9NYH9 597 aaKnown RBP8.76□□□□□ -1.01
CHD4-212ENST00000545083 IFNKQ9P0W0 207 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 GALPQ9UBC7 116 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 TFR2Q9UP52 801 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 NAALAD2Q9Y3Q0 740 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 DUSP10Q9Y6W6 482 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 MPDZO75970 2070 aa8.76□□□□□ -1.01
CHD4-212ENST00000545083 KCNE1BA0A087WTH5 132 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 FIGNL2A6NMB9 653 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 A8MUA0 341 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 FCHO1O14526 889 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 KPNA5O15131 536 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 CD3EAPO15446 510 aaKnown RBP8.75□□□□□ -1.01
CHD4-212ENST00000545083 B3GALT4O96024 378 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 FHP07954 510 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 RPS3P23396 243 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHD4-212ENST00000545083 PTPN7P35236 360 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 PPARGP37231 505 aaPredicted RBP8.75□□□□□ -1.01
CHD4-212ENST00000545083 TTPAP49638 278 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 EIF3BP55884 814 aaKnown RBP8.75□□□□□ -1.01
CHD4-212ENST00000545083 COPS2P61201 443 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 OLR1P78380 273 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 BTG2P78543 158 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 KCNJ11Q14654 390 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 ACSBG2Q5FVE4 666 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 AARS2Q5JTZ9 985 aaKnown RBP8.75□□□□□ -1.01
CHD4-212ENST00000545083 C16orf47Q6ZP98 133 aaPredicted RBP8.75□□□□□ -1.01
CHD4-212ENST00000545083 LINC00523Q86TU6 105 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 SLC26A11Q86WA9 606 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 CYP4X1Q8N118 509 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 APCDD1LQ8NCL9 501 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 TM4SF19Q96DZ7 209 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 MRFAP1L1Q96HT8 127 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 COX4I2Q96KJ9 171 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 CCDC42Q96M95 316 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 BIRC8Q96P09 236 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 OR1F2PQ96R84 312 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 CNPPD1Q9BV87 410 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 DEFB126Q9BYW3 111 aa8.75□□□□□ -1.01
CHD4-212ENST00000545083 ANKHQ9HCJ1 492 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms