RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CPTPQ5TA50 214 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ANGPTL8Q6UXH0 198 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PDSS2Q86YH6 399 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ADGRG5Q8IZF4 528 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 C16orf78Q8WTQ4 265 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 TESCQ96BS2 214 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 FCRL1Q96LA6 429 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 DUSP26Q9BV47 211 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 WSB2Q9NYS7 404 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 TCRBV5S2A0A599 114 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 GPR89AB7ZAQ6 455 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 MYO1DO94832 1006 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 GPR89BP0CG08 455 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 LAPTM5Q13571 262 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 RNF145Q96MT1 663 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 KAT8Q9H7Z6 458 aaKnown RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 MRPS30Q9NP92 439 aaKnown RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 MCM8Q9UJA3 840 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 MAGED1Q9Y5V3 778 aaPredicted RBP13.09□□□□□ -0.31
HCFC2-202ENST00000544223 ASXL3Q9C0F0 2248 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 LRP4O75096 1905 aa13.09□□□□□ -0.31
HCFC2-202ENST00000544223 PVRP15151 417 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 ENGP17813 658 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 POLR2CP19387 275 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 AQP1P29972 269 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 CLNS1AP54105 237 aaKnown RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 KIAA1024LP59773 190 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 PCDH1Q08174 1060 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 EIF2B5Q13144 721 aaKnown RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 GPR18Q14330 331 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SPIN4Q56A73 249 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 OGFRL1Q5TC84 451 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SYT13Q7L8C5 426 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 TMEM132CQ8N3T6 1108 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 ZNF548Q8NEK5 533 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 NETO1Q8TDF5 533 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 NCLNQ969V3 563 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 REPS1Q96D71 796 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 ITCHQ96J02 903 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 GBP5Q96PP8 586 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 COQ10BQ9H8M1 238 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 DTNAQ9Y4J8 743 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 A0A1W2PS29 197 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SERTM1A2A2V5 107 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 TMPRSS11DO60235 418 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SH3BP5O60239 455 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 C6orf47O95873 294 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 C9P02748 559 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 HOXB9P17482 250 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 NELFEP18615 380 aaKnown RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SLC7A1P30825 629 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 IST1P53990 364 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 EEFSECP57772 596 aaKnown RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 RAB8AP61006 207 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 HBA1P69905 142 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 ZNF763Q0D2J5 394 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 LCN8Q6JVE9 175 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 UBE3DQ7Z6J8 389 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 SLC9B2Q86UD5 537 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 AMIGO1Q86WK6 493 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 OR2L3Q8NG85 312 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 EME1Q96AY2 570 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 CPPED1Q9BRF8 314 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 KCNH6Q9H252 994 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 EHD1Q9H4M9 534 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 RMI1Q9H9A7 625 aa13.08□□□□□ -0.32
HCFC2-202ENST00000544223 TEX10Q9NXF1 929 aaPredicted RBP13.08□□□□□ -0.32
HCFC2-202ENST00000544223 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 GSAPA4D1B5 854 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 FOXE1O00358 373 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 SOCS2O14508 198 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 GSTA4O15217 222 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 CASC3O15234 703 aaKnown RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 NME6O75414 186 aaPredicted RBP13.07□□□□□ -0.32
HCFC2-202ENST00000544223 STAMBPO95630 424 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 WNT1P04628 370 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ALPPL2P10696 532 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 CD6P30203 668 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 CCR3P51677 355 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 DMWDQ09019 674 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 FZD2Q14332 565 aa13.07□□□□□ -0.32
HCFC2-202ENST00000544223 ARHGAP19Q14CB8 494 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms