RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 C1orf185Q5T7R7 199 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 RTL6Q6ICC9 239 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 LRRC8BQ6P9F7 803 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 PAPD4Q6PIY7 484 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 NPNTQ6UXI9 565 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ANKRD37Q7Z713 158 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ZNF227Q86WZ6 799 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 KIF18BQ86Y91 864 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SLC13A5Q86YT5 568 aaPredicted RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 HIPK1Q86Z02 1210 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ZC3H7AQ8IWR0 971 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SHISA5Q8N114 240 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 LRRC75A-AS1Q8N1F1 130 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 KIF2BQ8N4N8 673 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 AMER3Q8N944 861 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 LINC01555Q8NAE3 123 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 IPMKQ8NFU5 416 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 NEK11Q8NG66 645 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 OR5K2Q8NHB8 316 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 C16orf52Q8NHV5 167 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 M1APQ8TC57 530 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 UBASH3BQ8TF42 649 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ZUFSPQ96AP4 578 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 CAPZA3Q96KX2 299 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 C10orf90Q96M02 699 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SMC6Q96SB8 1091 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 CCL19Q99731 98 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 AARSD1Q9BTE6 412 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ACAT2Q9BWD1 397 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SGPP1Q9BX95 441 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 PLA2G12AQ9BZM1 189 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 AMBRA1Q9C0C7 1298 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 VN1R1Q9GZP7 353 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 EPB41L4BQ9H329 900 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 LRTM1Q9HBL6 345 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 GLOD4Q9HC38 313 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SMARCAL1Q9NZC9 954 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 B4GALT7Q9UBV7 327 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ADGRE2Q9UHX3 823 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 EIF3LQ9Y262 564 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 RUVBL1Q9Y265 456 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 DRG1Q9Y295 367 aaKnown RBP4.46□□□□□ -1.7
LIMS1-214ENST00000542845 FAM215AQ9Y5M1 114 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 LIPGQ9Y5X9 500 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 SCINQ9Y6U3 715 aa4.46□□□□□ -1.7
LIMS1-214ENST00000542845 ZNF407Q9C0G0 2248 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ATP6AP2A0A1C7CYW4 349 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 A0A1W2PQ72 361 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ANKRD34BA5PLL1 514 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 A8MUA0 341 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TARM1B6A8C7 271 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 EEF1E1-BLOC1S5C9J1V9 151 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 H0YGG7 62 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ACOT7O00154 380 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 FCHO1O14526 889 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 DVL2O14641 736 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 EEF1E1O43324 174 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ATP6AP2O75787 350 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 CDC123O75794 336 aaPredicted RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 AGTP01019 485 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HRGP04196 525 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ACADLP28330 430 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 PKLRP30613 574 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 CD68P34810 354 aaPredicted RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 SLC26A3P40879 764 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ARHGAP25P42331 645 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 AVPR1BP47901 424 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 MAN2A2P49641 1150 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HLCSP50747 726 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 WNT3AP56704 352 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 OR4D2P58180 307 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ARF3P61204 181 aaPredicted RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 IFI35P80217 286 aaPredicted RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 PPIDQ08752 370 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 RPA4Q13156 261 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TNK1Q13470 666 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 NSDHLQ15738 373 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HSPB2Q16082 182 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HADHQ16836 314 aaKnown RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TYSND1Q2T9J0 566 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 FKBP15Q5T1M5 1219 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 WLSQ5T9L3 541 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ZBTB37Q5TC79 503 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 CCDC181Q5TID7 509 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 HEPHL1Q6MZM0 1159 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 FBXO42Q6P3S6 717 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 PRSS57Q6UWY2 283 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 CYP4Z2PQ8N1L4 340 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TMEM156Q8N614 296 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 CSNK1A1LQ8N752 337 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 RELL2Q8NC24 303 aaPredicted RBP4.45□□□□□ -1.7
LIMS1-214ENST00000542845 ADCY4Q8NFM4 1077 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 TNIP2Q8NFZ5 429 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 OR13C4Q8NGS5 318 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 OR9A4Q8NGU2 314 aa4.45□□□□□ -1.7
LIMS1-214ENST00000542845 DTX3LQ8TDB6 740 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms