RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SLC35A2P78381 396 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 IL5RAQ01344 420 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 UBE3AQ05086 875 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DPTQ07507 201 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 RBBP4Q09028 425 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 FCHO2Q0JRZ9 810 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ELP6Q0PNE2 266 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PDE7AQ13946 482 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 HKDC1Q2TB90 917 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 KLHL35Q6PF15 583 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 XKR5Q6UX68 686 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DENND4AQ7Z401 1863 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 VTCN1Q7Z7D3 282 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 C11orf65Q8NCR3 313 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 TMIEQ8NEW7 156 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 BPIFB6Q8NFQ5 453 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 OR10Q1Q8NGQ4 319 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 CDC26Q8NHZ8 85 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 SGCDQ92629 289 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 TANKQ92844 425 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 FOXJ1Q92949 421 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 C7orf34Q96L11 122 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 BARD1Q99728 777 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DPEP2Q9H4A9 486 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 RIBC2Q9H4K1 309 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 MTG2Q9H4K7 406 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 REEP4Q9H6H4 257 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 MYNNQ9NPC7 610 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ATAD3AQ9NVI7 634 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ADPRHL2Q9NX46 363 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 THUMPD1Q9NXG2 353 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 ITM2BQ9Y287 266 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 TPRKBQ9Y3C4 175 aa6.3□□□□□ -1.4
PTPRO-208ENST00000542557 SAMHD1Q9Y3Z3 626 aaKnown RBP6.3□□□□□ -1.4
PTPRO-208ENST00000542557 GNG14A0A1W2PPG7 69 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PIPSLA2A3N6 862 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 MYO1GB0I1T2 1018 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 hCG_2039718K7EN88 272 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GABARAPO95166 117 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FKBP9O95302 570 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 BCL10O95999 233 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 C1GALT1C1LP0DN25 315 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF182P17025 639 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CEBPBP17676 345 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PBLDP30039 288 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CTNNB1P35222 781 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 BMPR1AP36894 532 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CRYBA2P53672 197 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KCNJ10P78508 379 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 MVKQ03426 396 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FADDQ13158 208 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SLBPQ14493 270 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KIAA1614Q5VZ46 1190 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ADNP2Q6IQ32 1131 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 LINC00299Q6ZSB3 139 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SLC16A12Q6ZSM3 486 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 B3GNT8Q7Z7M8 397 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ETFBKMTQ8IXQ9 262 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 CELF5Q8N6W0 485 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TTC29Q8NA56 475 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR52N2Q8NGI0 321 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 OR9A1PQ8NGU1 263 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 POF1BQ8WVV4 589 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NUS1Q96E22 293 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 MTERF3Q96E29 417 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 DPH2Q9BQC3 489 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GABARAPL3Q9BY60 117 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PREBQ9HCU5 417 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TBC1D23Q9NUY8 699 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PDP1Q9P0J1 537 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 EXO1Q9UQ84 846 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GMPPBQ9Y5P6 360 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 HCFC2Q9Y5Z7 792 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PCM1Q15154 2024 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 LRRK1Q38SD2 2015 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF99A8MXY4 864 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 TMEM229AB2RXF0 380 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 KPNA3O00505 521 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 SUV39H1O43463 412 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GPR37L1O60883 481 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 BPNT1O95861 308 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 RB1P06400 928 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 FURINP09958 794 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NPPBP16860 134 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ZNF8P17098 575 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PTX3P26022 381 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 ACVR2AP27037 513 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PIK3CBP42338 1070 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GJA8P48165 433 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PXNP49023 591 aaPredicted RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 MVDP53602 400 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 GP2P55259 537 aaKnown RBP6.29□□□□□ -1.4
PTPRO-208ENST00000542557 NTHL1P78549 312 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 PHEXP78562 749 aa6.29□□□□□ -1.4
PTPRO-208ENST00000542557 C16orf72Q14CZ0 275 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms