RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 NAGSQ8N159 534 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 LIX1Q8N485 282 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 FAM46DQ8NEK8 389 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ZFPM2Q8WW38 1151 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 VPS33AQ96AX1 596 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 APOLD1Q96LR9 279 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PAIP1Q9H074 479 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 TMEM45AQ9NWC5 275 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SPHK1Q9NYA1 384 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 DLGAP4Q9Y2H0 992 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CABIN1Q9Y6J0 2220 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 SH3BGRLO75368 114 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ETHE1O95571 254 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CHRM5P08912 532 aaPredicted RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 BCKDHAP12694 445 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 AMD1P17707 334 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 RPL5P46777 297 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 RXRGP48443 463 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 C21orf59P57076 290 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 KCNK10P57789 538 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 RPS13P62277 151 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 UBE2IP63279 158 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 ABATP80404 500 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CCNIQ14094 377 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 GPR18Q14330 331 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 CMPK2Q5EBM0 449 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ADCK2Q7Z695 626 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SLC37A2Q8TED4 501 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ZDHHC1Q8WTX9 485 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 MRPS30Q9NP92 439 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 TSC22D4Q9Y3Q8 395 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SNRNP200O75643 2136 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 ASPDHA6ND91 283 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 BBIP1A8MTZ0 92 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ISM1B1AKI9 464 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ANGPT2O15123 496 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PRICKLE3O43900 615 aaPredicted RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 TRMUO75648 421 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 CCNDBP1O95273 360 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PRPS2P11908 318 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 TDGF1P13385 188 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 JAK1P23458 1154 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PEBP1P30086 187 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 SLC5A2P31639 672 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PIK3CBP42338 1070 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 POLR2JP52435 117 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 REEP5Q00765 189 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ACSM2AQ08AH3 577 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 RCAN2Q14206 197 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SF1Q15637 639 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 C6orf183Q5T699 404 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 ACSM2BQ68CK6 577 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 C16orf89Q6UX73 402 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 C1orf210Q8IVY1 113 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SFTPA2Q8IWL1 248 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 OR2L3Q8NG85 312 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 OR4K1Q8NGD4 311 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 LMX1AQ8TE12 382 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 METTL2AQ96IZ6 378 aaKnown RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 CDRT15Q96T59 188 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 PITHD1Q9GZP4 211 aaPredicted RBP8.33□□□□□ -1.08
THBS3-210ENST00000541576 WDR41Q9HAD4 459 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 DMRT3Q9NQL9 472 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 SPASTQ9UBP0 616 aa8.33□□□□□ -1.08
THBS3-210ENST00000541576 FAM234BA2RU67 622 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 B4DGG1 531 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 BTN3A3O00478 584 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 MRASO14807 208 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 ACPPP15309 386 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 TACR1P25103 407 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 CMPK1P30085 196 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 HNRNPKP61978 463 aaKnown RBP eCLIP8.32□□□□□ -1.08
THBS3-210ENST00000541576 CSNK1G2P78368 415 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 CSTF1Q05048 431 aaKnown RBP8.32□□□□□ -1.08
THBS3-210ENST00000541576 LYSMD4Q5XG99 296 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 NOXRED1Q6NXP6 359 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 SLC9B2Q86UD5 537 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 GKN2Q86XP6 184 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 ADGRF3Q8IZF5 1079 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 FAM9CQ8IZT9 166 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 CLHC1Q8NHS4 586 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 SLC22A18Q96BI1 424 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 DPY30Q9C005 99 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 POMPQ9Y244 141 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 SH3GLB1Q9Y371 365 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 NDUFAF1Q9Y375 327 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 PCDHGA7Q9Y5G6 932 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 IGKV1-8A0A0C4DH67 115 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 A0A1W2PP18 115 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 TMEM221A6NGB7 291 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 ANKDD1BA6NHY2 528 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 M0R296 226 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 MYO1DO94832 1006 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 DHPSP49366 369 aaPredicted RBP8.32□□□□□ -1.08
THBS3-210ENST00000541576 SPIN4Q56A73 249 aa8.32□□□□□ -1.08
THBS3-210ENST00000541576 C11orf74Q86VG3 221 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms