RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SPG11Q96JI7 2443 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 STATHP02808 62 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 OR4D2P58180 307 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 HSF1Q00613 529 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 RNFT1Q5M7Z0 435 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 TMEM211Q6ICI0 200 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 NEPROQ6NW34 567 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 CES3Q6UWW8 571 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 ASPGQ86U10 573 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 PDSS2Q86YH6 399 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 SHISA5Q8N114 240 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 INTS1Q8N201 2190 aaKnown RBP25.16■■□□□ 1.62
CHFR-218ENST00000540963 FAM57AQ8TBR7 257 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 TMEM125Q96AQ2 219 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 SLC30A3Q99726 388 aa25.16■■□□□ 1.62
CHFR-218ENST00000540963 EIF3FO00303 357 aaPredicted RBP25.15■■□□□ 1.62
CHFR-218ENST00000540963 RDH16O75452 317 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 SLC35G6P0C7Q6 338 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 TPSB2P20231 275 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 TRHRP34981 398 aaPredicted RBP25.15■■□□□ 1.62
CHFR-218ENST00000540963 PTGS2P35354 604 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 MEF2AQ02078 507 aaPredicted RBP25.15■■□□□ 1.62
CHFR-218ENST00000540963 HERC3Q15034 1050 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 TPSAB1Q15661 275 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 NIPAL1Q6NVV3 410 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 CYHR1Q6ZMK1 362 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 C3P1Q6ZMU1 363 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 RNF10Q8N5U6 811 aaKnown RBP25.15■■□□□ 1.62
CHFR-218ENST00000540963 CPSF7Q8N684 471 aaKnown RBP25.15■■□□□ 1.62
CHFR-218ENST00000540963 KCT2Q8NC54 265 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 GIMAP7Q8NHV1 300 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 SLC13A3Q8WWT9 602 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 POM121Q96HA1 1249 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 TNFRSF10DQ9UBN6 386 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 DHRS7Q9Y394 339 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 NAALAD2Q9Y3Q0 740 aa25.15■■□□□ 1.62
CHFR-218ENST00000540963 TPP2P29144 1249 aaPredicted RBP25.14■■□□□ 1.62
CHFR-218ENST00000540963 GRK3P35626 688 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 ST13P50502 369 aaKnown RBP25.14■■□□□ 1.62
CHFR-218ENST00000540963 TBPL1P62380 186 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 SKP1P63208 163 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 ZNF468Q5VIY5 522 aaPredicted RBP25.14■■□□□ 1.62
CHFR-218ENST00000540963 ARMC10Q8N2F6 343 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 ZCCHC10Q8TBK6 192 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 PEX11GQ96HA9 241 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 MACROD1Q9BQ69 325 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 CCDC68Q9H2F9 335 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 MED16Q9Y2X0 877 aa25.14■■□□□ 1.62
CHFR-218ENST00000540963 KLF13Q9Y2Y9 288 aaPredicted RBP25.14■■□□□ 1.62
CHFR-218ENST00000540963 JAK1P23458 1154 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 CCND1P24385 295 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 HLCSP50747 726 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 SIX1Q15475 284 aaPredicted RBP25.13■■□□□ 1.61
CHFR-218ENST00000540963 CAPN13Q6MZZ7 669 aaPredicted RBP25.13■■□□□ 1.61
CHFR-218ENST00000540963 SLC26A11Q86WA9 606 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 C17orf64Q86WR6 236 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 ZNF227Q86WZ6 799 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 AFAP1L2Q8N4X5 818 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 LILRB4Q8NHJ6 448 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 TSLPQ969D9 159 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 TBC1D20Q96BZ9 403 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 ZKSCAN5Q9Y2L8 839 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 COMMD10Q9Y6G5 202 aa25.13■■□□□ 1.61
CHFR-218ENST00000540963 KLRC4-KLRK1H3BQV0 150 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 CDC123O75794 336 aaPredicted RBP25.12■■□□□ 1.61
CHFR-218ENST00000540963 FHP07954 510 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 CHRNB4P30926 498 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 PTGER1P34995 402 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 MLF1P58340 268 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 CUL1Q13616 776 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 LRRC8EQ6NSJ5 796 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 UBE2R2Q712K3 238 aaPredicted RBP25.12■■□□□ 1.61
CHFR-218ENST00000540963 C16orf52Q8NHV5 167 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 CCDC138Q96M89 665 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 SARGQ9BW04 601 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 SLC24A3Q9HC58 644 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 GUCA1BQ9UMX6 200 aa25.12■■□□□ 1.61
CHFR-218ENST00000540963 PHF3Q92576 2039 aaKnown RBP25.12■■□□□ 1.61
CHFR-218ENST00000540963 FCHO1O14526 889 aa25.11■■□□□ 1.61
CHFR-218ENST00000540963 TFECO14948 347 aaPredicted RBP25.11■■□□□ 1.61
CHFR-218ENST00000540963 ZNHIT1O43257 154 aa25.11■■□□□ 1.61
CHFR-218ENST00000540963 COILP38432 576 aaPredicted RBP25.11■■□□□ 1.61
CHFR-218ENST00000540963 SARNPP82979 210 aaKnown RBP25.11■■□□□ 1.61
CHFR-218ENST00000540963 ZNF470Q6ECI4 717 aa25.11■■□□□ 1.61
CHFR-218ENST00000540963 MFSD9Q8NBP5 474 aa25.11■■□□□ 1.61
CHFR-218ENST00000540963 CLK4Q9HAZ1 481 aaKnown RBP25.11■■□□□ 1.61
CHFR-218ENST00000540963 A0A1B0GTH9 108 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 FAM221AA4D161 298 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 CTAGE9A4FU28 777 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 LCMT2O60294 686 aaKnown RBP25.1■■□□□ 1.61
CHFR-218ENST00000540963 TPOP07202 933 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 ITGA8P53708 1063 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 TFF3Q07654 80 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 GSTA5Q7RTV2 222 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 CD163Q86VB7 1156 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 DMRTC2Q8IXT2 367 aaPredicted RBP25.1■■□□□ 1.61
CHFR-218ENST00000540963 LMNTD2Q8IXW0 634 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 KIF2BQ8N4N8 673 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 CD200R1Q8TD46 325 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 RBCK1Q9BYM8 510 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms