RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.01■□□□□ 0.15
CD9-209ENST00000540891 TBC1D19Q8N5T2 526 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 CREB3L4Q8TEY5 395 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 NACC2Q96BF6 587 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 WDR34Q96EX3 536 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 CRB3Q9BUF7 120 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 TGIF2Q9GZN2 237 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 SLC6A16Q9GZN6 736 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 MLXIPLQ9NP71 852 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 MKKSQ9NPJ1 570 aaPredicted RBP16.01■□□□□ 0.15
CD9-209ENST00000540891 MAP4K5Q9Y4K4 846 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 MED13Q9UHV7 2174 aa16.01■□□□□ 0.15
CD9-209ENST00000540891 COL6A6A6NMZ7 2263 aa16■□□□□ 0.15
CD9-209ENST00000540891 B8ZZF3 427 aa16■□□□□ 0.15
CD9-209ENST00000540891 C4orf51C9J302 202 aa16■□□□□ 0.15
CD9-209ENST00000540891 MKRN2OSH3BPM6 223 aa16■□□□□ 0.15
CD9-209ENST00000540891 AGPSO00116 658 aa16■□□□□ 0.15
CD9-209ENST00000540891 KLHL18O94889 574 aa16■□□□□ 0.15
CD9-209ENST00000540891 B3GALT4O96024 378 aa16■□□□□ 0.15
CD9-209ENST00000540891 E2F2Q14209 437 aa16■□□□□ 0.15
CD9-209ENST00000540891 SETDB1Q15047 1291 aa16■□□□□ 0.15
CD9-209ENST00000540891 ADNP2Q6IQ32 1131 aa16■□□□□ 0.15
CD9-209ENST00000540891 TCTN3Q6NUS6 607 aa16■□□□□ 0.15
CD9-209ENST00000540891 SNX31Q8N9S9 440 aa16■□□□□ 0.15
CD9-209ENST00000540891 FDCSPQ8NFU4 85 aa16■□□□□ 0.15
CD9-209ENST00000540891 YIPF2Q9BWQ6 316 aa16■□□□□ 0.15
CD9-209ENST00000540891 CAPS2Q9BXY5 557 aa16■□□□□ 0.15
CD9-209ENST00000540891 EHD1Q9H4M9 534 aa16■□□□□ 0.15
CD9-209ENST00000540891 ANKHQ9HCJ1 492 aa16■□□□□ 0.15
CD9-209ENST00000540891 SEMA3GQ9NS98 782 aa16■□□□□ 0.15
CD9-209ENST00000540891 C14orf105Q9NVL8 296 aa16■□□□□ 0.15
CD9-209ENST00000540891 C3orf18Q9UK00 162 aa16■□□□□ 0.15
CD9-209ENST00000540891 NAALAD2Q9Y3Q0 740 aa16■□□□□ 0.15
CD9-209ENST00000540891 PCDHGA9Q9Y5G4 932 aaKnown RBP16■□□□□ 0.15
CD9-209ENST00000540891 SYCE1LA8MT33 242 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 PEX12O00623 359 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 CLGNO14967 610 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 DNAJB6O75190 326 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 ALOX12BO75342 701 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 RDH16O75452 317 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 JRKO75564 520 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 BMP10O95393 424 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 TBX6O95947 436 aaPredicted RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 SERPIND1P05546 499 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 SNRPAP09012 282 aaKnown RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 ZNF888P0CJ79 500 aaPredicted RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 SMIM10L1P0DMW3 83 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 RRADP55042 308 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 DOC2AQ14183 400 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 LACTB2Q53H82 288 aaPredicted RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 TMIGD1Q6UXZ0 262 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 TIFABQ6ZNK6 161 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 VN1R5Q7Z5H4 357 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 PTRH1Q86Y79 214 aaKnown RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 TRPV3Q8NET8 790 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 OR5T3Q8NGG3 340 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 UTP15Q8TED0 518 aaKnown RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 SMIM10Q96HG1 83 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 FER1L6-AS2Q96M78 137 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 KLHL31Q9H511 634 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 NT5DC2Q9H857 520 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 HCN3Q9P1Z3 774 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 FETUBQ9UGM5 382 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 FBXL4Q9UKA2 621 aa15.99■□□□□ 0.15
CD9-209ENST00000540891 ZNF490Q9ULM2 529 aaPredicted RBP15.99■□□□□ 0.15
CD9-209ENST00000540891 CFAP46Q8IYW2 2715 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 ZNF860A6NHJ4 632 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 LRRC14BA6NHZ5 514 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 ESPNB1AK53 854 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 IDSB3KWA1 339 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 K7EPI3 171 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 GALR3O60755 368 aaPredicted RBP15.98■□□□□ 0.15
CD9-209ENST00000540891 H2AFYO75367 372 aaKnown RBP15.98■□□□□ 0.15
CD9-209ENST00000540891 WFS1O76024 890 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 IGHEP01854 428 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 SERPINA6P08185 405 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 COL6A2P12110 1019 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 ALOX12P18054 663 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 CXCR2P25025 360 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 EMP2P54851 167 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 RGS1Q08116 209 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 PCDH1Q08174 1060 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 NAA30Q147X3 362 aaPredicted RBP15.98■□□□□ 0.15
CD9-209ENST00000540891 HERC3Q15034 1050 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 RBBP7Q16576 425 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 PFKFB4Q16877 469 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 DEFB134Q4QY38 66 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 XKR6Q5GH73 641 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 KLC3Q6P597 504 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 TMEM151AQ8N4L1 468 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 OR11G2Q8NGC1 345 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 OR51Q1Q8NH59 317 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 MZB1Q8WU39 189 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 PTCD3Q96EY7 689 aaKnown RBP15.98■□□□□ 0.15
CD9-209ENST00000540891 SLC25A23Q9BV35 468 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 NUDT9Q9BW91 350 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 PITHD1Q9GZP4 211 aaPredicted RBP15.98■□□□□ 0.15
CD9-209ENST00000540891 XPR1Q9UBH6 696 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 OPTCQ9UBM4 332 aa15.98■□□□□ 0.15
CD9-209ENST00000540891 NUP210LQ5VU65 1888 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms