RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PNMA8CA0A1B0GUJ8 204 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ANKDD1BA6NHY2 528 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TEX46H3BTG2 121 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ECI2O75521 394 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 PGLSO95336 258 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 APODP05090 189 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CYP2A7P20853 494 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CTSKP43235 329 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 PIK3CGP48736 1102 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SUOXP51687 545 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SMSP52788 366 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 DGKQP52824 942 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 LAPTM4AQ15012 233 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SYT16Q17RD7 645 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 AMZ1Q400G9 498 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 MINDY4Q4G0A6 757 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 RAB41Q5JT25 222 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 LAIR1Q6GTX8 287 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CAPN13Q6MZZ7 669 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 PAMR1Q6UXH9 720 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GPRIN3Q6ZVF9 776 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 AHSA2Q719I0 299 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 RTN4RL1Q86UN2 441 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 HORMAD1Q86X24 394 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 OR10Q1Q8NGQ4 319 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 LINC01599Q8WXQ3 324 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 OR8D1Q8WZ84 308 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 FCGR1BQ92637 280 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 PHF21AQ96BD5 680 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 PYCR2Q96C36 320 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 RHBDF1Q96CC6 855 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TRMT61AQ96FX7 289 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 MMP28Q9H239 520 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TIGARQ9NQ88 270 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 HEBP1Q9NRV9 189 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ERVK13-1Q9NX77 482 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 VAPAQ9P0L0 249 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 POLR3HQ9Y535 204 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 PCDHGB6Q9Y5F9 930 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 PEX16Q9Y5Y5 336 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 STX16O14662 325 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 FGF10O15520 208 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 RECQL5O94762 991 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 OR4F21O95013 312 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 EPN2O95208 641 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SLC35G4P0C7Q5 338 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 G6PDP11413 515 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 HOXB6P17509 224 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 CTRB1P17538 263 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TIE1P35590 1138 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SLC9A3P48764 834 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 IL2P60568 153 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ERVK-21P61565 698 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TSNQ15631 228 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 SMN1Q16637 294 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 UPP1Q16831 310 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TCTN1Q2MV58 587 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 FAM26DQ5JW98 314 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 BRMS1LQ5PSV4 323 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CTRB2Q6GPI1 263 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 GRASPQ7Z6J2 395 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 DNAJB7Q7Z6W7 309 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 P3H2Q8IVL5 708 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 TOP6BLQ8N6T0 577 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CDYL2Q8N8U2 506 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 OR52E4Q8NGH9 312 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SELENOMQ8WWX9 145 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 HBEGFQ99075 208 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 COPS8Q99627 209 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 AARSD1Q9BTE6 412 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 DERL2Q9GZP9 239 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SMG9Q9H0W8 520 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 IMPAD1Q9NX62 359 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 EHD3Q9NZN3 535 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CCDC59Q9P031 241 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 ZMAT5Q9UDW3 170 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 PCTPQ9UKL6 214 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 MKLN1Q9UL63 735 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.06□□□□□ -1.6
PROM1-220ENST00000540805 SATB2Q9UPW6 733 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 RNF6Q9Y252 685 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 HCN4Q9Y3Q4 1203 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GRIP1Q9Y3R0 1128 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 INSL6Q9Y581 213 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 ANKRD36A6QL64 1941 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SCN5AQ14524 2016 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 KIAA1671Q9BY89 1806 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 NPEPPSL1A6NEC2 478 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SLC38A8A6NNN8 435 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 LOC110117498-PIK3R3F6TDL0 507 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 H3BQ06 376 aaPredicted RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 CD3EAPO15446 510 aaKnown RBP5.06□□□□□ -1.6
PROM1-220ENST00000540805 GMFGO60234 142 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 EFCAB14O75071 495 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 CREG1O75629 220 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 SERPINA1P01009 418 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 RETP07949 1114 aa5.06□□□□□ -1.6
PROM1-220ENST00000540805 GADD45AP24522 165 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms