RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 BGNP21810 368 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 PIK3CGP48736 1102 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 VSX2P58304 361 aaPredicted RBP15.92■□□□□ 0.14
UBC-208ENST00000540700 ACY1Q03154 408 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 RELAQ04206 551 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 RBBP7Q16576 425 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 HKDC1Q2TB90 917 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 TCHHL1Q5QJ38 904 aaPredicted RBP15.92■□□□□ 0.14
UBC-208ENST00000540700 TMTC4Q5T4D3 741 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 PWWP2BQ6NUJ5 590 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 GOLGA6L1Q8N7Z2 621 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 L3MBTL4Q8NA19 623 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 AGAP11Q8TF27 550 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 PTCD3Q96EY7 689 aaKnown RBP15.92■□□□□ 0.14
UBC-208ENST00000540700 NTMT1Q9BV86 223 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 CAPS2Q9BXY5 557 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 ENAMQ9NRM1 1142 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
UBC-208ENST00000540700 HEATR5BQ9P2D3 2071 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 POLR1CO15160 346 aaPredicted RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 NVLO15381 856 aaKnown RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 ITM2AO43736 263 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 OR1F1O43749 312 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 OR4F21O95013 312 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 CCNG1P51959 295 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 FOXA1P55317 472 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 RPS15AP62244 130 aaKnown RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 HYAL2Q12891 473 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 LCP2Q13094 533 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 NAA25Q14CX7 972 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 IGFBP7Q16270 282 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 PRTGQ2VWP7 1150 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 WASHC2DQ5SRD0 308 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 GRHL2Q6ISB3 625 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 NUDCD3Q8IVD9 361 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 SLC38A9Q8NBW4 561 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 CREB3L4Q8TEY5 395 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 PPP4R1Q8TF05 950 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 TM4SF19Q96DZ7 209 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 TAAR9Q96RI9 348 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 KCNA7Q96RP8 456 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 ZNF382Q96SR6 550 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 PAIP2Q9BPZ3 127 aaKnown RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 AIF1LQ9BQI0 150 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 SHCBP1LQ9BZQ2 653 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 C20orf27Q9GZN8 174 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 ACTR8Q9H981 624 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 AKAP7Q9P0M2 348 aaPredicted RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 RARRES3Q9UL19 164 aa15.91■□□□□ 0.14
UBC-208ENST00000540700 MRPS2Q9Y399 296 aaKnown RBP15.91■□□□□ 0.14
UBC-208ENST00000540700 C4orf51C9J302 202 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 BIRC5O15392 142 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 LYPLA1O75608 230 aaPredicted RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 EIF2S1P05198 315 aaKnown RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 ITGA1P56199 1179 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 RBBP5Q15291 538 aaKnown RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 CHI3L2Q15782 390 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 ZC3H12BQ5HYM0 836 aaKnown RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 LIPJQ5W064 366 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 TMIGD1Q6UXZ0 262 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 LAS2Q8IYD9 372 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 SHISA5Q8N114 240 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 ZNF655Q8N720 491 aaPredicted RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 C10orf90Q96M02 699 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 EFCAB11Q9BUY7 163 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 DDA1Q9BW61 102 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 SPRY4Q9C004 299 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 EPN3Q9H201 632 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 NT5DC2Q9H857 520 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 RUVBL1Q9Y265 456 aaKnown RBP15.9■□□□□ 0.14
UBC-208ENST00000540700 PCDHGA3Q9Y5H0 932 aa15.9■□□□□ 0.14
UBC-208ENST00000540700 FITM1A5D6W6 292 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 NPHS1O60500 1241 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 UGDHO60701 494 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 OR2B3O76000 313 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 CLDN9O95484 217 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 OTCP00480 354 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 CHN1P15882 459 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 HTR6P50406 440 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 IL11RAQ14626 422 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 ZRSR2Q15696 482 aaKnown RBP15.89■□□□□ 0.13
UBC-208ENST00000540700 CPSF6Q16630 551 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBC-208ENST00000540700 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBC-208ENST00000540700 GGTA1PQ4G0N0 100 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 HHATQ5VTY9 493 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 MILR1Q7Z6M3 343 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 ASPGQ86U10 573 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 PPP1R3BQ86XI6 285 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
UBC-208ENST00000540700 CSNK1A1LQ8N752 337 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 OR7G3Q8NG95 312 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 WDR20Q8TBZ3 569 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 ATP6V1E2Q96A05 226 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 RHBGQ9H310 441 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 AKIRIN1Q9H9L7 192 aaPredicted RBP15.89■□□□□ 0.13
UBC-208ENST00000540700 FARSBQ9NSD9 589 aaKnown RBP15.89■□□□□ 0.13
UBC-208ENST00000540700 NKIRAS1Q9NYS0 192 aa15.89■□□□□ 0.13
UBC-208ENST00000540700 TRPS1Q9UHF7 1281 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms