RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 SNX33Q8WV41 574 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 YIPF6Q96EC8 236 aa10.74□□□□□ -0.69
PBX1-212ENST00000540236 ZNF471Q9BX82 626 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 NKX6-2Q9C056 277 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 ZNF436Q9C0F3 470 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 MRTO4Q9UKD2 239 aaKnown RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 COL1A1P02452 1464 aaPredicted RBP10.74□□□□□ -0.69
PBX1-212ENST00000540236 A0A0B4J203 849 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CPSF4LA6NMK7 179 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 CYP17A1P05093 508 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 NOS2P35228 1153 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TLE2Q04725 743 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 FADDQ13158 208 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 OR5AK3PQ8NH89 298 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 P2RX7Q99572 595 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 DOK1Q99704 481 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 B4DXG7 233 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TLR4O00206 839 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 EFCAB14O75071 495 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZNF254O75437 659 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 S100A2P29034 98 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 RPS19P39019 145 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 NPRL3Q12980 569 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 MAD2L1BPQ15013 274 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SELENOMQ8WWX9 145 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 LENG9Q96B70 501 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TMEM231Q9H6L2 316 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 DNAJC15Q9Y5T4 150 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SPEF2Q9C093 1822 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 LRP6O75581 1613 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ACSM4P0C7M7 580 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ITGB5P18084 799 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 GIFP27352 417 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 RGS6P49758 472 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZNF551Q7Z340 670 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 RELL2Q8NC24 303 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 GIMAP1Q8WWP7 306 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TMEM80Q96HE8 168 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 LIN7BQ9HAP6 207 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 FBXL12Q9NXK8 326 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CICQ96RK0 1608 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 MGAT4DA6NG13 374 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 EDIL3O43854 480 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZNF432O94892 652 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ENGP17813 658 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 RHCEP18577 417 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 AKR1C3P42330 323 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 RFX3P48380 749 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 HCAR3P49019 387 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 DYRK1AQ13627 763 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZNF234Q14588 700 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 PGM5Q15124 567 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 UNC50Q53HI1 259 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 XKR3Q5GH77 459 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 GTF2IRD2BQ6EKJ0 949 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 GTF2IRD2Q86UP8 949 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 C4orf19Q8IY42 314 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TMEM192Q8IY95 271 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 IQCF1Q8N6M8 205 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 OR9Q2Q8NGE9 314 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 ZDHHC1Q8WTX9 485 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 TSPEARQ8WU66 669 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 DNASE1L2Q92874 299 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 PIP5K1AQ99755 562 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 OR51J1Q9H342 316 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 C5P01031 1676 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 KANTRA0A1W2PQU2 76 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CDC7O00311 574 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 PCDH17O14917 1159 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 HPRP00739 348 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 PBLDP30039 288 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 STAT5AP42229 794 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CDKN2DP55273 166 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CAMK2GQ13555 558 aaPredicted RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 OR4F3Q6IEY1 312 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SHQ1Q6PI26 577 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 RASGRP3Q8IV61 690 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 MINDY1Q8N5J2 469 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 DNAJA3Q96EY1 480 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 PKP4Q99569 1192 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 GPR21Q99679 349 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 CMSS1Q9BQ75 279 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 BRINP2Q9C0B6 783 aa10.73□□□□□ -0.69
PBX1-212ENST00000540236 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
PBX1-212ENST00000540236 PGRMC2O15173 223 aa10.72□□□□□ -0.69
PBX1-212ENST00000540236 TRIM3O75382 744 aaPredicted RBP10.72□□□□□ -0.69
PBX1-212ENST00000540236 URODP06132 367 aa10.72□□□□□ -0.69
PBX1-212ENST00000540236 SLC19A1P41440 591 aa10.72□□□□□ -0.69
PBX1-212ENST00000540236 CLCN5P51795 746 aa10.72□□□□□ -0.69
PBX1-212ENST00000540236 CLCN7P51798 805 aa10.72□□□□□ -0.69
PBX1-212ENST00000540236 SLC3A1Q07837 685 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms